Detail information of GWHGAAEX017192/evm.TU.scaffold_8.293


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|302869654|ref|YP_003838291.1|4.00E-09serine/threonine-protein kinase-like domain-containing protein [Micromonospora aurantiaca ATCC 27029]
KOGKOG11871.00E-180Serine/threonine protein kinase
nrgi|672137039|ref|XP_008792231.1|0PREDICTED: probable receptor-like protein kinase At3g55450 [Phoenix dactylifera]
Swissprottr|Q9LFP7|Y5158_ARATH1.00E-57Probable receptor-like protein kinase At5g15080
trEMBLtr|A0A061EHG2|A0A061EHG2_THECC0Kinase superfamily protein isoform 1 {ECO:0000313|EMBL:EOY04460.1}
TAIRAT3G087601.00E-180Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000041132432211327529+
Transcript Sequence

Network for GWHGAAEX017192

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr1754473.10E-27
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-II

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.290
SRR2545915Juvenile tuber25.080
SRP108465SRR5643513five period of Gastrodia elata13.750
SRR5643514five period of Gastrodia elata12.710
SRR5643515five period of Gastrodia elata14.620
SRR5643524five period of Gastrodia elata17.520
SRR5643525five period of Gastrodia elata27.100
SRR5643528five period of Gastrodia elata49.360
SRR5643658five period of Gastrodia elata23.370
SRR5643659five period of Gastrodia elata11.980
SRR5643660five period of Gastrodia elata9.120
SRR5643661five period of Gastrodia elata11.400
SRR5643662five period of Gastrodia elata11.260
SRR5643663five period of Gastrodia elata9.070
SRR5643664five period of Gastrodia elata11.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.110
SRR6049655Rhizomagastrodiae_C368-T10_good_111.760
SRR6049656Rhizomagastrodiae_C368-T07_good_112.240
SRR6049657Rhizomagastrodiae_C368-T07_good_110.070
SRR6049658Rhizomagastrodiae_C368-T04_good_16.820
SRR6049659Rhizomagastrodiae_C368-T04_good_17.950
SRR6049660Rhizomagastrodiae_C368-T01_good_112.630
SRR6049661Rhizomagastrodiae_C368-T04_good_19.740
SRR6049662Rhizomagastrodiae_C368-T01_good_114.000
SRR6049663Rhizomagastrodiae_C368-T01_good_113.700
SRR6049664Rhizomagastrodiae_C368-T10_good_110.310
SRR6049665Rhizomagastrodiae_C368-T10_good_110.310
SRP279888GastroGastrodia elata tuber 7.15
JuvenJuvenile tuber7.34
Mother_GastroMother tuber of Gastrodia elata 56.61
Mother_JuvenMother tuber of Juvenile 47.53