Detail information of GWHGAAEX017197/evm.TU.scaffold_8.298


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320161254|ref|YP_004174478.1|2.00E-46putative phosphatidate cytidylyltransferase [Anaerolinea thermophila UNI-1]
KOGKOG44534.00E-101Predicted ER membrane protein
nrgi|672182837|ref|XP_008811675.1|7.01E-128PREDICTED: probable phytol kinase 2, chloroplastic [Phoenix dactylifera]
Swissprottr|Q5N9J9|PHYK2_ORYSJ7.00E-124Probable phytol kinase 2, chloroplastic (Precursor)
trEMBLtr|I1HT23|I1HT23_BRADI5.00E-126Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G54047.1}
TAIRAT5G585604.00E-101Phosphatidate cytidylyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000041144472811456369+
Transcript Sequence

Network for GWHGAAEX017197

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15892FOLK Biosynthesis of secondary metabolites map01110
Biosynthesis of antibioticsmap01130
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.500
SRR2545915Juvenile tuber15.980
SRP108465SRR5643513five period of Gastrodia elata44.680
SRR5643514five period of Gastrodia elata47.320
SRR5643515five period of Gastrodia elata39.300
SRR5643524five period of Gastrodia elata48.940
SRR5643525five period of Gastrodia elata11.910
SRR5643528five period of Gastrodia elata10.400
SRR5643658five period of Gastrodia elata6.760
SRR5643659five period of Gastrodia elata23.520
SRR5643660five period of Gastrodia elata19.550
SRR5643661five period of Gastrodia elata20.600
SRR5643662five period of Gastrodia elata14.340
SRR5643663five period of Gastrodia elata16.890
SRR5643664five period of Gastrodia elata16.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.910
SRR6049655Rhizomagastrodiae_C368-T10_good_135.280
SRR6049656Rhizomagastrodiae_C368-T07_good_132.340
SRR6049657Rhizomagastrodiae_C368-T07_good_127.210
SRR6049658Rhizomagastrodiae_C368-T04_good_120.500
SRR6049659Rhizomagastrodiae_C368-T04_good_122.390
SRR6049660Rhizomagastrodiae_C368-T01_good_129.240
SRR6049661Rhizomagastrodiae_C368-T04_good_123.490
SRR6049662Rhizomagastrodiae_C368-T01_good_125.690
SRR6049663Rhizomagastrodiae_C368-T01_good_123.980
SRR6049664Rhizomagastrodiae_C368-T10_good_138.840
SRR6049665Rhizomagastrodiae_C368-T10_good_138.840
SRP279888GastroGastrodia elata tuber 12.25
JuvenJuvenile tuber44.56
Mother_GastroMother tuber of Gastrodia elata 14.89
Mother_JuvenMother tuber of Juvenile 24.01