Detail information of GWHGAAEX017217/evm.TU.scaffold_80.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12821.00E-134Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|672169982|ref|XP_008805039.1|1.88E-144PREDICTED: serine carboxypeptidase-like 27 [Phoenix dactylifera]
Swissprottr|Q9SFB5|SCP27_ARATH4.00E-135Serine carboxypeptidase-like 27 (Precursor)
trEMBLtr|M0TJV5|M0TJV5_MUSAM4.00E-143Carboxypeptidase {ECO:0000256|RuleBase:RU361156}
TAIRAT3G079901.00E-134serine carboxypeptidase-like 27

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000084248427252311-
Transcript Sequence

Network for GWHGAAEX017217

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S1023023.50E-80
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.110
SRR2545915Juvenile tuber19.050
SRP108465SRR5643513five period of Gastrodia elata27.130
SRR5643514five period of Gastrodia elata29.820
SRR5643515five period of Gastrodia elata26.480
SRR5643524five period of Gastrodia elata27.860
SRR5643525five period of Gastrodia elata21.460
SRR5643528five period of Gastrodia elata16.090
SRR5643658five period of Gastrodia elata21.670
SRR5643659five period of Gastrodia elata27.210
SRR5643660five period of Gastrodia elata26.630
SRR5643661five period of Gastrodia elata26.970
SRR5643662five period of Gastrodia elata24.600
SRR5643663five period of Gastrodia elata29.910
SRR5643664five period of Gastrodia elata21.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.990
SRR6049655Rhizomagastrodiae_C368-T10_good_134.480
SRR6049656Rhizomagastrodiae_C368-T07_good_122.610
SRR6049657Rhizomagastrodiae_C368-T07_good_120.930
SRR6049658Rhizomagastrodiae_C368-T04_good_118.780
SRR6049659Rhizomagastrodiae_C368-T04_good_117.060
SRR6049660Rhizomagastrodiae_C368-T01_good_118.660
SRR6049661Rhizomagastrodiae_C368-T04_good_114.710
SRR6049662Rhizomagastrodiae_C368-T01_good_111.240
SRR6049663Rhizomagastrodiae_C368-T01_good_114.080
SRR6049664Rhizomagastrodiae_C368-T10_good_132.530
SRR6049665Rhizomagastrodiae_C368-T10_good_132.530
SRP279888GastroGastrodia elata tuber 28.03
JuvenJuvenile tuber28.82
Mother_GastroMother tuber of Gastrodia elata 14.12
Mother_JuvenMother tuber of Juvenile 16.72