Detail information of GWHGAAEX017219/evm.TU.scaffold_80.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01660Karyopherin (importin) alpha
nrgi|672110092|ref|XP_008793530.1|0PREDICTED: importin subunit alpha-2 [Phoenix dactylifera]
Swissprottr|F4KF65|IMPA9_ARATH0Importin subunit alpha-9 {ECO:0000305}
trEMBLtr|M0RHT9|M0RHT9_MUSAM0Importin subunit alpha {ECO:0000256|PIRNR:PIRNR005673}
TAIRAT5G030700importin alpha isoform 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000084255866284362-
Transcript Sequence

Network for GWHGAAEX017219

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00514.22Arm1191573.70E-07
PF00514.22Arm3423749.10E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006606Biological Processprotein import into nucleus
GO:0061608Molecular Functionnuclear import signal receptor activity
GO:0005515Molecular Functionprotein binding
GO:0005737Cellular Componentcytoplasm
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.970
SRR2545915Juvenile tuber61.570
SRP108465SRR5643513five period of Gastrodia elata37.490
SRR5643514five period of Gastrodia elata34.670
SRR5643515five period of Gastrodia elata36.030
SRR5643524five period of Gastrodia elata31.900
SRR5643525five period of Gastrodia elata28.490
SRR5643528five period of Gastrodia elata26.560
SRR5643658five period of Gastrodia elata22.630
SRR5643659five period of Gastrodia elata77.560
SRR5643660five period of Gastrodia elata84.390
SRR5643661five period of Gastrodia elata67.210
SRR5643662five period of Gastrodia elata84.440
SRR5643663five period of Gastrodia elata79.330
SRR5643664five period of Gastrodia elata94.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.830
SRR6049655Rhizomagastrodiae_C368-T10_good_140.990
SRR6049656Rhizomagastrodiae_C368-T07_good_135.880
SRR6049657Rhizomagastrodiae_C368-T07_good_161.700
SRR6049658Rhizomagastrodiae_C368-T04_good_146.770
SRR6049659Rhizomagastrodiae_C368-T04_good_157.190
SRR6049660Rhizomagastrodiae_C368-T01_good_146.590
SRR6049661Rhizomagastrodiae_C368-T04_good_144.430
SRR6049662Rhizomagastrodiae_C368-T01_good_131.970
SRR6049663Rhizomagastrodiae_C368-T01_good_135.770
SRR6049664Rhizomagastrodiae_C368-T10_good_132.460
SRR6049665Rhizomagastrodiae_C368-T10_good_132.460
SRP279888GastroGastrodia elata tuber 97.44
JuvenJuvenile tuber97.17
Mother_GastroMother tuber of Gastrodia elata 51.00
Mother_JuvenMother tuber of Juvenile 69.79