Detail information of GWHGAAEX017234/evm.TU.scaffold_80.30
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1476 | 8.00E-33 | Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 |
| nr | gi|695052467|ref|XP_009414292.1| | 1.17E-41 | PREDICTED: probable beta-1,4-xylosyltransferase IRX9 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q75L84|GT51_ORYSJ | 7.00E-37 | Probable glucuronosyltransferase Os05g0123100 |
| trEMBL | tr|M0TSA8|M0TSA8_MUSAM | 4.00E-42 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P21050_001} |
| TAIR | AT2G37090 | 8.00E-33 | Nucleotide-diphospho-sugar transferases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 648622 | 654433 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017234
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03360.15 | Glyco_transf_43 | 10 | 107 | 3.40E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015018 | Molecular Function | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.620 |
| SRR2545915 | Juvenile tuber | 1.050 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.440 |
| SRR5643514 | five period of Gastrodia elata | 0.250 | |
| SRR5643515 | five period of Gastrodia elata | 0.510 | |
| SRR5643524 | five period of Gastrodia elata | 0.180 | |
| SRR5643525 | five period of Gastrodia elata | 21.230 | |
| SRR5643528 | five period of Gastrodia elata | 20.440 | |
| SRR5643658 | five period of Gastrodia elata | 54.710 | |
| SRR5643659 | five period of Gastrodia elata | 0.180 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.100 | |
| SRR5643663 | five period of Gastrodia elata | 0.150 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.120 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.760 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.770 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.250 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.380 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.00 |