Detail information of GWHGAAEX017236/evm.TU.scaffold_80.32_evm.TU.scaffold_80.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695011945|ref|XP_009392709.1|2.27E-151PREDICTED: tetraspanin-3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9M1E7|TET3_ARATH1.00E-136Tetraspanin-3
trEMBLtr|M0SFJ5|M0SFJ5_MUSAM8.00E-152Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P17790_001}
TAIRAT3G456004.00E-136tetraspanin3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000084659645676792-
Transcript Sequence

Network for GWHGAAEX017236

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00335.19Tetraspannin62633.00E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.640
SRR2545915Juvenile tuber37.600
SRP108465SRR5643513five period of Gastrodia elata63.270
SRR5643514five period of Gastrodia elata54.310
SRR5643515five period of Gastrodia elata52.880
SRR5643524five period of Gastrodia elata55.580
SRR5643525five period of Gastrodia elata102.820
SRR5643528five period of Gastrodia elata69.290
SRR5643658five period of Gastrodia elata102.620
SRR5643659five period of Gastrodia elata62.610
SRR5643660five period of Gastrodia elata53.590
SRR5643661five period of Gastrodia elata55.730
SRR5643662five period of Gastrodia elata44.900
SRR5643663five period of Gastrodia elata67.510
SRR5643664five period of Gastrodia elata69.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_174.680
SRR6049655Rhizomagastrodiae_C368-T10_good_164.680
SRR6049656Rhizomagastrodiae_C368-T07_good_183.750
SRR6049657Rhizomagastrodiae_C368-T07_good_163.270
SRR6049658Rhizomagastrodiae_C368-T04_good_162.010
SRR6049659Rhizomagastrodiae_C368-T04_good_157.740
SRR6049660Rhizomagastrodiae_C368-T01_good_171.930
SRR6049661Rhizomagastrodiae_C368-T04_good_161.800
SRR6049662Rhizomagastrodiae_C368-T01_good_180.920
SRR6049663Rhizomagastrodiae_C368-T01_good_157.070
SRR6049664Rhizomagastrodiae_C368-T10_good_180.880
SRR6049665Rhizomagastrodiae_C368-T10_good_180.880
SRP279888GastroGastrodia elata tuber 55.12
JuvenJuvenile tuber28.89
Mother_GastroMother tuber of Gastrodia elata 53.90
Mother_JuvenMother tuber of Juvenile 30.92