Detail information of GWHGAAEX017242/evm.TU.scaffold_80.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672109826|ref|XP_008792208.1|3.32E-150PREDICTED: uncharacterized protein LOC103708880 [Phoenix dactylifera]
Swissprottr|Q9M3G7|ATM_ARATH3.00E-11Serine/threonine-protein kinase ATM
trEMBLtr|F6HQZ0|F6HQZ0_VITVI1.00E-96Putative uncharacterized protein {ECO:0000313|EMBL:CCB57039.1}
TAIRAT3G096702.00E-47Tudor/PWWP/MBT superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000084900943904137+
Transcript Sequence

Network for GWHGAAEX017242

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00855.16PWWP1882715.20E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.750
SRR2545915Juvenile tuber21.590
SRP108465SRR5643513five period of Gastrodia elata20.320
SRR5643514five period of Gastrodia elata17.840
SRR5643515five period of Gastrodia elata15.090
SRR5643524five period of Gastrodia elata14.990
SRR5643525five period of Gastrodia elata14.490
SRR5643528five period of Gastrodia elata12.700
SRR5643658five period of Gastrodia elata14.920
SRR5643659five period of Gastrodia elata23.180
SRR5643660five period of Gastrodia elata23.290
SRR5643661five period of Gastrodia elata19.180
SRR5643662five period of Gastrodia elata22.450
SRR5643663five period of Gastrodia elata20.030
SRR5643664five period of Gastrodia elata20.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.310
SRR6049655Rhizomagastrodiae_C368-T10_good_123.200
SRR6049656Rhizomagastrodiae_C368-T07_good_121.280
SRR6049657Rhizomagastrodiae_C368-T07_good_125.850
SRR6049658Rhizomagastrodiae_C368-T04_good_124.750
SRR6049659Rhizomagastrodiae_C368-T04_good_131.100
SRR6049660Rhizomagastrodiae_C368-T01_good_126.150
SRR6049661Rhizomagastrodiae_C368-T04_good_124.130
SRR6049662Rhizomagastrodiae_C368-T01_good_124.560
SRR6049663Rhizomagastrodiae_C368-T01_good_124.360
SRR6049664Rhizomagastrodiae_C368-T10_good_122.160
SRR6049665Rhizomagastrodiae_C368-T10_good_122.160
SRP279888GastroGastrodia elata tuber 22.22
JuvenJuvenile tuber27.29
Mother_GastroMother tuber of Gastrodia elata 14.06
Mother_JuvenMother tuber of Juvenile 19.20