Detail information of GWHGAAEX017261/evm.TU.scaffold_80.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13622.00E-165Choline transporter-like protein
nrgi|695071089|ref|XP_009382602.1|0PREDICTED: CTL-like protein DDB_G0274487 [Musa acuminata subsp. malaccensis]
trEMBLtr|A3BMZ4|A3BMZ4_ORYSJ0Putative uncharacterized protein {ECO:0000313|EMBL:EAZ40933.1}
TAIRAT5G137602.00E-165Plasma-membrane choline transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008413159241322170+
Transcript Sequence

Network for GWHGAAEX017261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04515.11Choline_transpo1824651.90E-42
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.570
SRR2545915Juvenile tuber8.580
SRP108465SRR5643513five period of Gastrodia elata31.910
SRR5643514five period of Gastrodia elata35.420
SRR5643515five period of Gastrodia elata50.490
SRR5643524five period of Gastrodia elata34.240
SRR5643525five period of Gastrodia elata57.960
SRR5643528five period of Gastrodia elata47.620
SRR5643658five period of Gastrodia elata43.770
SRR5643659five period of Gastrodia elata51.790
SRR5643660five period of Gastrodia elata40.850
SRR5643661five period of Gastrodia elata46.850
SRR5643662five period of Gastrodia elata78.600
SRR5643663five period of Gastrodia elata57.780
SRR5643664five period of Gastrodia elata70.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.010
SRR6049655Rhizomagastrodiae_C368-T10_good_136.230
SRR6049656Rhizomagastrodiae_C368-T07_good_135.680
SRR6049657Rhizomagastrodiae_C368-T07_good_128.000
SRR6049658Rhizomagastrodiae_C368-T04_good_127.730
SRR6049659Rhizomagastrodiae_C368-T04_good_123.690
SRR6049660Rhizomagastrodiae_C368-T01_good_132.310
SRR6049661Rhizomagastrodiae_C368-T04_good_126.760
SRR6049662Rhizomagastrodiae_C368-T01_good_139.990
SRR6049663Rhizomagastrodiae_C368-T01_good_137.830
SRR6049664Rhizomagastrodiae_C368-T10_good_139.890
SRR6049665Rhizomagastrodiae_C368-T10_good_139.890
SRP279888GastroGastrodia elata tuber 44.12
JuvenJuvenile tuber43.32
Mother_GastroMother tuber of Gastrodia elata 46.12
Mother_JuvenMother tuber of Juvenile 33.07