Detail information of GWHGAAEX017262/evm.TU.scaffold_80.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30145.00E-53Protein involved in establishing cohesion between sister chromatids during DNA replication
nrgi|743818176|ref|XP_010931144.1|1.68E-104PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7-like, partial [Elaeis guineensis]
Swissprottr|A7UL74|CTF7_ARATH1.00E-73Protein CHROMOSOME TRANSMISSION FIDELITY 7
trEMBLtr|M0T817|M0T817_MUSAM6.00E-104Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P18190_001}
TAIRAT4G314005.00E-53damaged DNA binding;DNA-directed DNA polymerases

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008413253881340023-
Transcript Sequence

Network for GWHGAAEX017262

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13878.5zf-C2H2_3911298.70E-16
PF13880.5Acetyltransf_132853538.40E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.950
SRR2545915Juvenile tuber37.130
SRP108465SRR5643513five period of Gastrodia elata21.290
SRR5643514five period of Gastrodia elata21.580
SRR5643515five period of Gastrodia elata17.790
SRR5643524five period of Gastrodia elata21.920
SRR5643525five period of Gastrodia elata8.150
SRR5643528five period of Gastrodia elata6.070
SRR5643658five period of Gastrodia elata7.600
SRR5643659five period of Gastrodia elata29.540
SRR5643660five period of Gastrodia elata30.850
SRR5643661five period of Gastrodia elata33.990
SRR5643662five period of Gastrodia elata26.420
SRR5643663five period of Gastrodia elata28.260
SRR5643664five period of Gastrodia elata24.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.000
SRR6049655Rhizomagastrodiae_C368-T10_good_125.270
SRR6049656Rhizomagastrodiae_C368-T07_good_121.940
SRR6049657Rhizomagastrodiae_C368-T07_good_119.460
SRR6049658Rhizomagastrodiae_C368-T04_good_118.350
SRR6049659Rhizomagastrodiae_C368-T04_good_115.590
SRR6049660Rhizomagastrodiae_C368-T01_good_118.190
SRR6049661Rhizomagastrodiae_C368-T04_good_120.190
SRR6049662Rhizomagastrodiae_C368-T01_good_121.070
SRR6049663Rhizomagastrodiae_C368-T01_good_120.590
SRR6049664Rhizomagastrodiae_C368-T10_good_126.890
SRR6049665Rhizomagastrodiae_C368-T10_good_126.890
SRP279888GastroGastrodia elata tuber 27.88
JuvenJuvenile tuber23.83
Mother_GastroMother tuber of Gastrodia elata 7.00
Mother_JuvenMother tuber of Juvenile 13.02