Detail information of GWHGAAEX017273/evm.TU.scaffold_80.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01671.00E-67FOG: Armadillo/beta-catenin-like repeats
nrgi|743803676|ref|XP_010926990.1|1.41E-102PREDICTED: U-box domain-containing protein 4-like [Elaeis guineensis]
Swissprottr|Q8GUG9|PUB11_ARATH2.00E-16U-box domain-containing protein 11
trEMBLtr|M0TP12|M0TP12_MUSAM1.00E-91Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P09590_001}
TAIRAT1G08320_21.00E-67Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008415573751558370+
Transcript Sequence

Network for GWHGAAEX017273

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.960
SRR2545915Juvenile tuber5.100
SRP108465SRR5643513five period of Gastrodia elata20.090
SRR5643514five period of Gastrodia elata17.710
SRR5643515five period of Gastrodia elata21.670
SRR5643524five period of Gastrodia elata17.410
SRR5643525five period of Gastrodia elata25.080
SRR5643528five period of Gastrodia elata19.770
SRR5643658five period of Gastrodia elata27.510
SRR5643659five period of Gastrodia elata26.860
SRR5643660five period of Gastrodia elata25.070
SRR5643661five period of Gastrodia elata29.900
SRR5643662five period of Gastrodia elata33.060
SRR5643663five period of Gastrodia elata23.240
SRR5643664five period of Gastrodia elata28.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.860
SRR6049655Rhizomagastrodiae_C368-T10_good_116.320
SRR6049656Rhizomagastrodiae_C368-T07_good_118.660
SRR6049657Rhizomagastrodiae_C368-T07_good_116.280
SRR6049658Rhizomagastrodiae_C368-T04_good_121.980
SRR6049659Rhizomagastrodiae_C368-T04_good_120.680
SRR6049660Rhizomagastrodiae_C368-T01_good_121.370
SRR6049661Rhizomagastrodiae_C368-T04_good_123.000
SRR6049662Rhizomagastrodiae_C368-T01_good_122.840
SRR6049663Rhizomagastrodiae_C368-T01_good_123.360
SRR6049664Rhizomagastrodiae_C368-T10_good_123.250
SRR6049665Rhizomagastrodiae_C368-T10_good_123.250
SRP279888GastroGastrodia elata tuber 23.02
JuvenJuvenile tuber19.02
Mother_GastroMother tuber of Gastrodia elata 44.96
Mother_JuvenMother tuber of Juvenile 29.74