Detail information of GWHGAAEX017276/evm.TU.scaffold_80.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307129438|ref|YP_003881454.1|8.00E-57phospholipase C 4 [Dickeya dadantii 3937]
nrgi|743803661|ref|XP_010926985.1|0PREDICTED: non-specific phospholipase C2-like [Elaeis guineensis]
Swissprottr|O81020|NPC2_ARATH0Non-specific phospholipase C2 (Precursor)
trEMBLtr|A0A067L463|A0A067L463_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP43231.1}
TAIRAT2G268700non-specific phospholipase C2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008416618771666679+
Transcript Sequence

Network for GWHGAAEX017276

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04185.13Phosphoesterase333921.20E-104
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01114plc Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Inositol phosphate metabolismmap00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.220
SRR2545915Juvenile tuber7.330
SRP108465SRR5643513five period of Gastrodia elata10.920
SRR5643514five period of Gastrodia elata16.680
SRR5643515five period of Gastrodia elata9.030
SRR5643524five period of Gastrodia elata8.360
SRR5643525five period of Gastrodia elata71.770
SRR5643528five period of Gastrodia elata64.170
SRR5643658five period of Gastrodia elata55.660
SRR5643659five period of Gastrodia elata3.440
SRR5643660five period of Gastrodia elata1.020
SRR5643661five period of Gastrodia elata1.540
SRR5643662five period of Gastrodia elata1.250
SRR5643663five period of Gastrodia elata3.190
SRR5643664five period of Gastrodia elata1.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.330
SRR6049655Rhizomagastrodiae_C368-T10_good_125.760
SRR6049656Rhizomagastrodiae_C368-T07_good_120.860
SRR6049657Rhizomagastrodiae_C368-T07_good_114.210
SRR6049658Rhizomagastrodiae_C368-T04_good_119.790
SRR6049659Rhizomagastrodiae_C368-T04_good_118.430
SRR6049660Rhizomagastrodiae_C368-T01_good_125.060
SRR6049661Rhizomagastrodiae_C368-T04_good_126.330
SRR6049662Rhizomagastrodiae_C368-T01_good_141.290
SRR6049663Rhizomagastrodiae_C368-T01_good_129.110
SRR6049664Rhizomagastrodiae_C368-T10_good_121.990
SRR6049665Rhizomagastrodiae_C368-T10_good_121.990
SRP279888GastroGastrodia elata tuber 2.39
JuvenJuvenile tuber3.14
Mother_GastroMother tuber of Gastrodia elata 6.61
Mother_JuvenMother tuber of Juvenile 1.43