Gene detail

Detail information of GWHGAAEX017281/evm.TU.scaffold_80.80

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695047716\|ref\|XP_009411746.1\|	2.29E-130	PREDICTED: uncharacterized protein LOC103993412 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|A0A059BI81\|A0A059BI81_EUCGR	3.00E-116	Uncharacterized protein {ECO:0000313\|EMBL:KCW65912.1}

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000084	1751181	1757236	-

Transcript Sequence
>GWHTAAEX017281 TGTTGACTTGGAGCATATTTCTAAGGCAACATTGTGGTGCGCTATAGCGTCAAGCTTTCGGCTCAGTTGGCACTACGGCGCGCTGTAGCGTCTTTTACTTTGGAACTTGGCGCTGCGGAGCACTGGAGCGCCTTGGTCTCAGGTACTCTGATGACTCTTCGGATGAGCGAATCTTACAGATCAAATGTTACGAATAAACGAGCTGCATAGTCAATCTGAATGAATCTCTATATGATTTGATTGGGTGTTACGAACCCTTAACGAATAATCTGAGTGCCAAAATTTGAAACCCTAAACAAAACTTCTGATTTTTATGCATGTTATTCAAACAAGGAGAACTAGGGCTTTCAGCATCGTTTCTTTCTTATGCAAAGGCTGAACTCTTTCCTCTGCGTGCAATTCGTCTCCTTCCTCTACGTACGGTTCGAACATGTGCACGAAGCTAGAAGTCATTGACGAAACTCCGCATTCAAACCAAAGAACTAAAAAGCCATGAGCACTGCGTACACGTCCTTAGCCGCGCTTTCCCGCCCCGCGCTTTCCCTCCCCAAGCAAACCCTAAAAAAGAAGAAGAGCCATGCTGTGCCCTTCGTCTGCCTCAGCACCGGCGATACATCGCCGGAGCTCTCAATCGGCCGCGATTCATTGCCTCGACTCCGGCCGATCCTGCACGATTGGATGGACGCTGAGGGGTTCGAGACGAAGAGGGCGCGCTCAGAGCGGGACGATTTTTGCAAGCAGGTGGGTCGCCTCAGTACAGTTTGCTCGGAAACGAGCATTGCCATTGGCCTGGGAGCAGATCTGGCCCGGACGGCGATGCACATCGCCGCAGAGGACGATGCATTGTCTTCGCCGTCGTCAGAGCCAATCCCCTTCGAGGCATCCCTTGAGAAGCTAGATACCCTTTCCATGGAATTCTGCTCCCTCTACATCCACAGATCTTCCAGCTCTCCGGAGGACTTTCTCCGCAGCCTGGAAATGTACTTGTACGTCCACAAGAACTTTTGCAGGACGGATTCGATGTCTGATGCAAGATCATTGTATCTTCATTCTGTGTTAGTTTGCCGGACGGGTTCTCTGGTCATGCTCTCTCTGATCTACTCCGAGATGCTGAAAACCCTTCGCCGATACGGCCTCGTAAATTTTGACGCCGAGCTTTACTTCCCTCATGATCTCCTGAGCCTCCCCAGAGCTTATCAGAAGCAGAAGAGCAATCCCTCAGACCTTGCCCATATTTTGACCTCCAAGTCATTCCTGCTGGAGGTCCTCAGAAATCTGAAAAATGCATTCTGGCCATTCCAATGTAATCATTCTGATAGTCTGTTTATGAGGGCAGCTCAAGCCAAGCCCGAAGAAGAAAGCCATTCTAAGCTCTATATTGGGTTCCAGGCAGCTTCTCCAAAGGATACTCGCCATAGGCTCGGCTCTGGAGACATGCGGCGGGCTTTGGCTGCCTGCGAGCGTCTGATACTCCTCGGATCCCAACCTGAGGAACTTAGAGATTATGCAGTCCTTCTGTACCATTGCGGGCAATATGAAGACTGCTTGGATTACCTGAAGGTGTATCAAACCTCAAGAACAAGGAGGTTCAACCTAAGCAGAACAGATGCTATGGAGGAGAATATTGTAGAAAAACTGGCAGCTCGAGTAAACCGGATTCTGGAAGAGAGAGGCTGGAGCAGGCAATCTGCAGCACGTGTAAAACTTTGAAGGTTTTCTTCATTTTTTTCTGCGCAATTTTTGTATGCATGCTTTTGTACAGGAGAAATAGTCACATGTAACCCAATTTTCACCCGAGAACTGATCCAATAATATCTTCAAAATTAGCCAAAGGTTTTGCCAATGCGTTCTCTTTTTGTGTACCTTGTTTATATTATCTCATCATATGCACTTTTTGATAATTTGTTGCTCTAAGTGGTAGAACTCTTTCTATATCTTCCCATTAAAAATGAAATAAAAATTAAAACGTCTACTTCATTGGAACATCTAGTTGACAGAGGGAAACATAGGAAAATGGGTGGCAAGGAGAAAAGATGGGCTGGGAGCAACAATGAACTTGCTTGTCTTCACGATTGGAGGAGAACAAGAGAGGGGACTTAACTGATCCCTAGCCATGGAGGCAAAAATAAGAAATATGAATAAAAGCTTTTTAATTTCGTGTTTTTGATGGCTGAGATCTACCTCATAAAAGAAAGTTATTCTAAAAAATTGGTTTTCTGGTGGGCAGTGAAAGCAGCATTTCTCTTTGTATAATAGGAGCTCAGTGCTATAGTAGAAGGTTCAGTGTTCTCTGTCTTTTATAAAAAATTGTGTA

Network for GWHGAAEX017281

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13369.5	Transglut_core2	130	210	1.80E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.820
SRP064423	SRR2545915	Juvenile tuber	0.880
SRP108465	SRR5643513	five period of Gastrodia elata	0.940
	SRR5643514	five period of Gastrodia elata	1.200
	SRR5643515	five period of Gastrodia elata	1.310
	SRR5643524	five period of Gastrodia elata	1.030
	SRR5643525	five period of Gastrodia elata	1.950
	SRR5643528	five period of Gastrodia elata	1.960
	SRR5643658	five period of Gastrodia elata	0.790
	SRR5643659	five period of Gastrodia elata	2.610
	SRR5643660	five period of Gastrodia elata	1.160
	SRR5643661	five period of Gastrodia elata	1.430
	SRR5643662	five period of Gastrodia elata	8.210
	SRR5643663	five period of Gastrodia elata	3.450
	SRR5643664	five period of Gastrodia elata	5.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.800
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.970
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.080
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.500
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.500
SRP279888	Gastro	Gastrodia elata tuber	13.28
	Juven	Juvenile tuber	75.00
	Mother_Gastro	Mother tuber of Gastrodia elata	31.05
	Mother_Juven	Mother tuber of Juvenile	107.48