Gene detail

Detail information of GWHGAAEX017282/evm.TU.scaffold_80.84_evm.TU.scaffold_80.82

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|226228210\|ref\|YP_002762316.1\|	1.00E-131	hypothetical protein GAU_2804 [Gemmatimonas aurantiaca T-27]
nr	gi\|672117636\|ref\|XP_008782009.1\|	0	PREDICTED: uncharacterized protein LOC103701643 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0RPT5\|M0RPT5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P06050_001}
TAIR	AT3G55850	0	Amidohydrolase family

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000084	1759534	1867839	-

Transcript Sequence
>GWHTAAEX017282 TTGATCAGCTTAGGGTTTGATGGGGACATAGTCTCGGGCGCCTCCACCTTTCGAGCTAGGGATTTTTGGGCGATCGCTGCCGCTCTCGACACATGTGGTTTCTGGATATTTGCTAGAGTGGAGAGTATTCTCCATAGTTCAAGGGACTTCAGGATATTTGGTGCTGCCTTTTTCTTCTCTAGCCTCTCGGGGAATGCATGAAGTTTGGATTCTAAGGCGACAACTGCAGATCTCAACCATCTTTTAATTACAGGTGCTTACGGGATGGCAAAGCTATAAATATGTAATTTTGGGTGCTACGAGTGAAATTGCACGCGCAGCCAAATTTGTCAGCGAGCGCGGGAAAAAGGTAAACAATCTGCCGAGGAAATGCAAACGGCGGAATTAAAAGGCCTCCGTTCACTGTCCTCGAAGAAGACTCGCGTCCAATTTCATCGCTCTGCTCTTCTGCCGGCAGATCGACCGGCGTCCTCGCATGGCGGCTGGATTAGGGTTTCTAACTTTCGTTTCCGCTACAGCGGCCGCTATCTCGGCCGTCTTCATTTTTCTCCTCTTCAATCTCTCCTGGAGGGATCTGATTTGGGTTAAGGGTTTTTACTCTGGAGCGGATTTGGTGGTACGGAACGCAACGATCTACACCTGCGACCCAGAGATCCCCTTTGCAGAAGCGATGGCGGTCCGGAATGGGCGCATTCTCAGAATCGGATCCGATGCCTGGGTTCGGGATTTGATTGGTCTGAGGACGCGCGAGTTGAATTTCGACGGGAAGGTAATTCTACCGGGATTTATAGATTCTCACGTTCATTTGATTTTCGGTGGCCTGCAGATGGGATACGTGAAACTTAGAGGTGTTAAAAGTAAAGAAGATTTTGTGACGAGGGTGAAAGAAGCAGTGAAAGATAAACTCCCTGGTGATTGGCTACTAGGTGGAGGTTGGAATAATGATAATTGGGGTGGAGACTTGCCCACTGCTTCCTGGATTGATGATGTTACACGTGACAACCCGGTTTGGTTCTCACGTATGGATGGTCATATGGGTTTAGCCAACTCACTTGCTCTAAATATTGCTGAAATCACCAACACAAGTTTGGATCCTATTGGCGGGGCGATCTTGAAAACTGTACATGGAGAACCTTCCGGTCTTCTGATTGATTCTGCAACAAAGCTTGTCCTTACAGTAATCCCGGAAATATCAATCCATGAAAGGCGAGAGGCTTTGCTTAGGGCAAGCAAGTATGCCTTGATGAAGGGTGTGACCACAATGGTTGATATGGGAAGGTACTTTCCTGGAGCATCTATAGATCATTCATGGCAAGATCTTTCAGATGTTTATAAATGGGCTGATGCTTCTGGAAAAATGCTAATAAGAGTTTGCTTGTTCTTACCACTTCAGACGTGGACTCGCCTAAGAGATCTTTTCAAAAATAAAGGCAAATCCTTAAGTCAGTGGATTTACTTGGGTGGAGTCAAAGCATTTGCTGATGGGTCTTTGGGATCAAATAGTGCACTCTTCCATGAGCCCTATGAGGATGATCCTCATAATTATGGCTTGCAAGTGTCAGATTTCGAATGGCTCTTGAATGCTTCAGTGGAATCAGACAAATCTGGACTTCAGATTGCAGTGCATGCTATTGGCGATAAAGCAAATGACATGGTTTTAGATTTGTTTAACTCGGTAAAATCTGTCACTGAAGTTAGAGATCATAGATTCAGGATCGAACATGCCCAACATCTAGGACCAGAAGCAATTCGTCGTTTTGGTAGTCAAAATGTTATTGCCTCTGTACAGCCAGATCACATACTTGATGATGCTGATTCTGCTGAAAAGAAAATTGGGAAGACAAGAGCTCAGGAAGGGTCGTATTTATTCAGATCCCTTCTTGTAGGAGGTGCAAAGTTAGCTTTTGGTTCTGACTGGCCTGTTGCTGACATTGATCCACTTAGAAGCATCAAAACAGCAATGACCCGAACTCCTTTTGGACAGGAAGCTGCATGGATTCCTAGTGAGCGTGTTGAACTGCATGACGCACTAAACGCGCATACCATAGGGGCTGCTTATGCTTCCTTCCTCGACAACGAATTAGGCAGTCTCTCCCCCGGAAAATATGCGGATTTCGTCGTGCTGCCGGCTTCCTCGTGGGATGAATTTAAAGAAAATACACCTTCCAGTGTTTCCGCTACTTATGTAAGCGGCCTGCAGGCTTATCCTTGAAGCCTTTCAACGCTCACATGTACATCAATATAAATTTTAAGTGAGCGCTAAGTGCAATTACTAGATAATTAGCAGGTAGAATAATGCTTTAAACAAGCACTTTAAATGTTAATCAGCAAGTGAGTATGCTTAAAAAAAGACCAATTTCTTGTAGAATAATGCTTAAAACACATCCTACCCGCCAAGCTAAATTCCACAAGTTATATATAACATTTAGGTATTTATTTATTTATTTGTTTTGAGGTACATGGGGTGCACGAACTCTAGTGTTCTCACCTTGGCTTTGCTCATGACTAACAACTACTTTGGTTGCAACTTATGAGCATTGATAAATGATCATTGAACTATATAAATTGTGTATATTGTTTGCATTAATTTTTGTTTAATTTTTTTGCTTTACCTTTTTTTTCTGTATGATATCATTCGTTAGAAAAATACTATTTATA

Network for GWHGAAEX017282

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07969.10	Amidohydro_3	96	573	6.60E-81

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016810	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	57.600
SRP064423	SRR2545915	Juvenile tuber	56.070
SRP108465	SRR5643513	five period of Gastrodia elata	27.830
	SRR5643514	five period of Gastrodia elata	35.230
	SRR5643515	five period of Gastrodia elata	30.510
	SRR5643524	five period of Gastrodia elata	35.290
	SRR5643525	five period of Gastrodia elata	14.380
	SRR5643528	five period of Gastrodia elata	19.180
	SRR5643658	five period of Gastrodia elata	17.660
	SRR5643659	five period of Gastrodia elata	19.080
	SRR5643660	five period of Gastrodia elata	17.660
	SRR5643661	five period of Gastrodia elata	22.660
	SRR5643662	five period of Gastrodia elata	14.670
	SRR5643663	five period of Gastrodia elata	19.250
	SRR5643664	five period of Gastrodia elata	12.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.610
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.420
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.220
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.330
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.090
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	29.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	29.680
SRP279888	Gastro	Gastrodia elata tuber	12.00
	Juven	Juvenile tuber	17.68
	Mother_Gastro	Mother tuber of Gastrodia elata	13.16
	Mother_Juven	Mother tuber of Juvenile	16.94