Detail information of GWHGAAEX017286/evm.TU.scaffold_80.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428317322|ref|YP_007115204.1|1.00E-25REG-2-like, HAD superfamily (subfamily IA) hydrolase [Oscillatoria nigro-viridis PCC 7112]
KOGKOG30851.00E-129Predicted hydrolase (HAD superfamily)
nrgi|743803621|ref|XP_010926971.1|4.14E-154PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Elaeis guineensis]
trEMBLtr|M5W2P8|M5W2P8_PRUPE5.00E-153Uncharacterized protein {ECO:0000313|EMBL:EMJ03528.1}
TAIRAT2G412501.00E-129Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008418768871905607-
Transcript Sequence

Network for GWHGAAEX017286

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13419.5HAD_2902732.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms57.160
SRR2545915Juvenile tuber25.350
SRP108465SRR5643513five period of Gastrodia elata29.840
SRR5643514five period of Gastrodia elata27.460
SRR5643515five period of Gastrodia elata24.390
SRR5643524five period of Gastrodia elata28.070
SRR5643525five period of Gastrodia elata42.680
SRR5643528five period of Gastrodia elata30.410
SRR5643658five period of Gastrodia elata40.110
SRR5643659five period of Gastrodia elata17.500
SRR5643660five period of Gastrodia elata16.840
SRR5643661five period of Gastrodia elata16.940
SRR5643662five period of Gastrodia elata21.420
SRR5643663five period of Gastrodia elata18.640
SRR5643664five period of Gastrodia elata23.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.980
SRR6049655Rhizomagastrodiae_C368-T10_good_113.610
SRR6049656Rhizomagastrodiae_C368-T07_good_128.540
SRR6049657Rhizomagastrodiae_C368-T07_good_130.860
SRR6049658Rhizomagastrodiae_C368-T04_good_140.910
SRR6049659Rhizomagastrodiae_C368-T04_good_151.730
SRR6049660Rhizomagastrodiae_C368-T01_good_129.210
SRR6049661Rhizomagastrodiae_C368-T04_good_134.850
SRR6049662Rhizomagastrodiae_C368-T01_good_126.120
SRR6049663Rhizomagastrodiae_C368-T01_good_125.550
SRR6049664Rhizomagastrodiae_C368-T10_good_129.110
SRR6049665Rhizomagastrodiae_C368-T10_good_129.110
SRP279888GastroGastrodia elata tuber 23.21
JuvenJuvenile tuber24.17
Mother_GastroMother tuber of Gastrodia elata 52.67
Mother_JuvenMother tuber of Juvenile 26.51