Gene detail

Detail information of GWHGAAEX017334/evm.TU.scaffold_80.147

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743842896\|ref\|XP_010937925.1\|	0	PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Elaeis guineensis]
Swissprot	tr\|P81898\|PNAA_PRUDU	3.00E-102	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A heavy chain
trEMBL	tr\|M0T5C2\|M0T5C2_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P08730_001}
TAIR	AT5G05480	3.00E-108	Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000084	3054320	3056545	-

Transcript Sequence
>GWHTAAEX017334 AAAAATTAATGTAAATAATTAAAAAAAAAGTGACAAGCATAGTTTATCATTTTTCTTTGTTATTAAAACCCTAATTATCTATCTTTTTGGGATATGTAAGTAGAAAAGTAACATTTTTCTTAAAACTATTCCTACAAGTCAGTAAGATGCACAGCCTCCCAATCTTTGTTATTTACACATCTGCCAGTAAATATTTACACTGTCAACCAATCTGATGAAATTTTAGAGTTGCAGTACAGAATTGAGGGTTAGATTTGCAAATATAAACTATTAATTGGGGTGCTTGCTAACCATCCGATCCCTATATTAACATTCCCTCGCATCCCTGAATTCCCCCATAAACAATTGAATTCTAATATGAACAACAAAATGACGTCCCTATTCCCTCTTCTTCTCCTCCTCCTCCTCACTCTTCTCAGCCTCTCACTGCTATCGGCAGCCGTGCCTGATTCTCCTGCATATGATTACTCCTTCGACAGCCCTCCCCCGCCTTCGTCATCCCCGCCGTCTCCGTCCCCATCCCCGGAGGTGGTTCCAATGAACACCACCCTTGAGTACATGGATCCCACCCTCCCCCCTCTCCTCCCCTCCCAAAACCCCCAATGCTCCATCCAAATCCTCCAACACAACTTCCCGGCCGCGGCCGCCCCTCCGCTGTTCTTCCCATACACCCCTCCGCCCTCCTGCCCGTCACCCTGGTCCCGTGTAATCCTCGAGCTCTCTGCCGCCGCCTCGGACATCCAGAGGAGCCGCATCGCCGCCATTTGGCTGGCAGGCGCTGAGGTCCTTCGCACCTCCACCCCCTTCTCGCTCTCCCCTGGCGTCTTCTGGCGCATCCGCAAGGATGTCACGCGCTACACCGCCCTCCTCCGCCGCCCCGCCCGCTTCTCCATCATGCTCAGCCCAACCGGCCCCGGGAACACCACCGCACTTCCGGGCGTCTGTGCTGTCAACATCTCCCTTCACTTCTACCGCGGTGCGGTGGGCCGCCTCGGGTCCCACCCCATAATCCGCGGCCTCTACCGCGAGCCTGCTGACTTGATCATCCCCATCTCCCGCTCTGACGCCGCCGCCGCTGCCGGACTGGGCTACTGGTTCCGGGTCGGCAACGAGTCCGAAGCTTGTGGCCGCACTGTCCTCGTCCCTAGCAACGCCTACCGCGCCATACTGGAGGTCTTCATCTCCCACCACGACGACGACGAGTACTGGTACGCGAACCCCCTGCGGTCGGACGACGTCGCCGGCGGCGGGCTGTCGTCCAAGAAGCCGAATGGGGGGTTCCGACAGGTGGTCGCCACGATCGATGGAAAGTACGCCGGCTCGGCGGTGCCGTTCCCGGTGATCTCGCCGGGCTCGGTCAACCCCTTCTTTTGGGCACCGGTGGCGGCCATCGGGGCCTACGACCACCCTTCCTATGACCTTGAATTGACGCCCTTCGTCGGGAAGCTTCTCGACGGGAGGCCGCACGAGTTTGGGCTGATGGTGAAGGAGAGCCAGCCGTACTGGCTGGTGGATGCCAATCTCCATCTTTGGCTGGACGCGTGGTCGGACGCTGTGGAGGGGGCGCTGGTGCGGTACAAGGTTCCGCCTATGCGGCTTGAGCGGCAAGCCGATTGGAAGAATCTGGACGGGAAGTCGGAGATGGAGGGGCAGGTCATTATCCGCTTTTCAGGCTGGGTCAGCTCGTCGGAGGGGAACGTGACGACAAGCGTCAGGCATAAGTTGAAATTCAAGAGCCACGTGGAGGTCGAAGAGAAGGGAGAGATGAAATCCGTGGAGATGGAGATGAAGGCGAGGACCAATCTGAGGATTGAGAAGGACCACATGGTGGTCGGGAGAGCGGTGGTGGAAACGGAGGCGCCGTTGAATATGGTGACGGTGAGATCCAACGGCGGAGGGGGGACAAAGATTCTAAAGACGAAGCTTTCTCATGAGATGATGGAGGCGAGGAGCTCGACAGAGGGGAAGATGGGGGATTGGATTAGCACGATAACGGACCGACAGGACTCAGAAGGGTCGGTTCTGGTTGGGGAGGAAGGGGAGGTAGTTTGGGGCAGCGGAGATACTAAGTCTGTTTATAAATTCAGGGATGAGAAGAAGTGCTATTTGAGGACGGTCAGTATGGTAGGAGGGAAGGTGGAGGAAGATGAAGAGAGCTCCTCGTGCGCTGCCTTTGCCGTCCACCAGAAGCCTTCGGAGTTGAACCAACTGCTGATCACGCTGTAA

Network for GWHGAAEX017334

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12222.7	PNGaseA	78	503	4.00E-80

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.780
SRP064423	SRR2545915	Juvenile tuber	6.820
SRP108465	SRR5643513	five period of Gastrodia elata	9.330
	SRR5643514	five period of Gastrodia elata	20.770
	SRR5643515	five period of Gastrodia elata	18.670
	SRR5643524	five period of Gastrodia elata	32.240
	SRR5643525	five period of Gastrodia elata	3.170
	SRR5643528	five period of Gastrodia elata	1.230
	SRR5643658	five period of Gastrodia elata	2.360
	SRR5643659	five period of Gastrodia elata	2.830
	SRR5643660	five period of Gastrodia elata	1.990
	SRR5643661	five period of Gastrodia elata	4.030
	SRR5643662	five period of Gastrodia elata	8.910
	SRR5643663	five period of Gastrodia elata	6.430
	SRR5643664	five period of Gastrodia elata	52.640
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.380
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	27.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	24.840
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	26.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.850
SRP279888	Gastro	Gastrodia elata tuber	4.44
	Juven	Juvenile tuber	2.70
	Mother_Gastro	Mother tuber of Gastrodia elata	1.17
	Mother_Juven	Mother tuber of Juvenile	1.87