Detail information of GWHGAAEX017348/evm.TU.scaffold_80.165


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158334201|ref|YP_001515373.1|1.00E-146bacteriochlorophyll/chlorophyll a synthase [Acaryochloris marina MBIC11017]
nrgi|590628182|ref|XP_007026650.1|0UbiA prenyltransferase family protein isoform 2 [Theobroma cacao]
Swissprottr|Q5W6H5|CHLG_ORYSJ0Chlorophyll synthase, chloroplastic (Precursor)
trEMBLtr|A0A061ES34|A0A061ES34_THECC0UbiA prenyltransferase family protein isoform 2 {ECO:0000313|EMBL:EOY07152.1}
TAIRAT3G518200UbiA prenyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008436215173670209-
Transcript Sequence

Network for GWHGAAEX017348

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01040.17UbiA963493.20E-37
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K04040chlG, bchG Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046408Molecular Functionchlorophyll synthetase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.980
SRR2545915Juvenile tuber18.130
SRP108465SRR5643513five period of Gastrodia elata26.520
SRR5643514five period of Gastrodia elata29.690
SRR5643515five period of Gastrodia elata24.560
SRR5643524five period of Gastrodia elata26.740
SRR5643525five period of Gastrodia elata6.100
SRR5643528five period of Gastrodia elata5.260
SRR5643658five period of Gastrodia elata10.990
SRR5643659five period of Gastrodia elata10.110
SRR5643660five period of Gastrodia elata9.290
SRR5643661five period of Gastrodia elata10.690
SRR5643662five period of Gastrodia elata10.160
SRR5643663five period of Gastrodia elata10.340
SRR5643664five period of Gastrodia elata10.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.910
SRR6049655Rhizomagastrodiae_C368-T10_good_141.610
SRR6049656Rhizomagastrodiae_C368-T07_good_121.020
SRR6049657Rhizomagastrodiae_C368-T07_good_118.220
SRR6049658Rhizomagastrodiae_C368-T04_good_19.980
SRR6049659Rhizomagastrodiae_C368-T04_good_111.350
SRR6049660Rhizomagastrodiae_C368-T01_good_113.820
SRR6049661Rhizomagastrodiae_C368-T04_good_114.370
SRR6049662Rhizomagastrodiae_C368-T01_good_117.120
SRR6049663Rhizomagastrodiae_C368-T01_good_114.040
SRR6049664Rhizomagastrodiae_C368-T10_good_131.900
SRR6049665Rhizomagastrodiae_C368-T10_good_131.900
SRP279888GastroGastrodia elata tuber 6.85
JuvenJuvenile tuber10.26
Mother_GastroMother tuber of Gastrodia elata 3.13
Mother_JuvenMother tuber of Juvenile 6.41