Detail information of GWHGAAEX017357/evm.TU.scaffold_80.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31035.00E-90Rab GTPase interacting factor, Golgi membrane protein
nrgi|672159714|ref|XP_008799623.1|1.75E-122PREDICTED: protein YIPF5 homolog [Phoenix dactylifera]
trEMBLtr|M0SWG1|M0SWG1_MUSAM8.00E-121Protein YIPF {ECO:0000256|RuleBase:RU361264}
TAIRAT3G527605.00E-90Integral membrane Yip1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008437269283727689+
Transcript Sequence

Network for GWHGAAEX017357

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04893.16Yip1982401.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.520
SRR2545915Juvenile tuber8.380
SRP108465SRR5643513five period of Gastrodia elata12.850
SRR5643514five period of Gastrodia elata8.690
SRR5643515five period of Gastrodia elata11.720
SRR5643524five period of Gastrodia elata8.210
SRR5643525five period of Gastrodia elata18.040
SRR5643528five period of Gastrodia elata13.680
SRR5643658five period of Gastrodia elata11.990
SRR5643659five period of Gastrodia elata21.200
SRR5643660five period of Gastrodia elata22.990
SRR5643661five period of Gastrodia elata24.500
SRR5643662five period of Gastrodia elata21.750
SRR5643663five period of Gastrodia elata23.230
SRR5643664five period of Gastrodia elata18.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.860
SRR6049655Rhizomagastrodiae_C368-T10_good_113.380
SRR6049656Rhizomagastrodiae_C368-T07_good_114.800
SRR6049657Rhizomagastrodiae_C368-T07_good_112.990
SRR6049658Rhizomagastrodiae_C368-T04_good_18.180
SRR6049659Rhizomagastrodiae_C368-T04_good_16.510
SRR6049660Rhizomagastrodiae_C368-T01_good_19.780
SRR6049661Rhizomagastrodiae_C368-T04_good_110.900
SRR6049662Rhizomagastrodiae_C368-T01_good_19.390
SRR6049663Rhizomagastrodiae_C368-T01_good_115.010
SRR6049664Rhizomagastrodiae_C368-T10_good_115.070
SRR6049665Rhizomagastrodiae_C368-T10_good_115.070
SRP279888GastroGastrodia elata tuber 13.11
JuvenJuvenile tuber10.61
Mother_GastroMother tuber of Gastrodia elata 11.86
Mother_JuvenMother tuber of Juvenile 9.50