Detail information of GWHGAAEX017366/evm.TU.scaffold_80.186
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108804931|ref|YP_644868.1| | 7.00E-80 | HAD family hydrolase [Rubrobacter xylanophilus DSM 9941] |
| KOG | KOG1221 | 5.00E-173 | Acyl-CoA reductase |
| nr | gi|695035734|ref|XP_009405296.1| | 0 | PREDICTED: probable fatty acyl-CoA reductase 4 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q93ZB9|FACR3_ARATH | 0 | Fatty acyl-CoA reductase 3 |
| trEMBL | tr|M0T8D1|M0T8D1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P19330_001} |
| TAIR | AT4G33790 | 5.00E-173 | Jojoba acyl CoA reductase-related male sterility protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 3864372 | 3868986 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017366
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07993.11 | NAD_binding_4 | 17 | 318 | 8.70E-78 |
| PF03015.18 | Sterile | 392 | 489 | 7.00E-21 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13356 | FAR | Synthesis and degradation of ketone bodies | map00072 |
| Peroxisome | map04146 | ||
| Longevity regulating pathway - worm | map04212 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 21.200 |
| SRR2545915 | Juvenile tuber | 49.670 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 30.740 |
| SRR5643514 | five period of Gastrodia elata | 37.540 | |
| SRR5643515 | five period of Gastrodia elata | 30.060 | |
| SRR5643524 | five period of Gastrodia elata | 38.410 | |
| SRR5643525 | five period of Gastrodia elata | 42.100 | |
| SRR5643528 | five period of Gastrodia elata | 18.390 | |
| SRR5643658 | five period of Gastrodia elata | 86.120 | |
| SRR5643659 | five period of Gastrodia elata | 4.960 | |
| SRR5643660 | five period of Gastrodia elata | 6.130 | |
| SRR5643661 | five period of Gastrodia elata | 5.500 | |
| SRR5643662 | five period of Gastrodia elata | 3.940 | |
| SRR5643663 | five period of Gastrodia elata | 5.250 | |
| SRR5643664 | five period of Gastrodia elata | 2.350 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.580 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.230 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.930 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.410 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.770 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 30.170 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.400 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.540 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.540 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.25 |
| Juven | Juvenile tuber | 8.09 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 44.39 | |
| Mother_Juven | Mother tuber of Juvenile | 70.88 |