Detail information of GWHGAAEX017367/evm.TU.scaffold_80.187
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|152995563|ref|YP_001340398.1| | 1.00E-69 | inosine/uridine-preferring nucleoside hydrolase [Marinomonas sp. MWYL1] |
| KOG | KOG2938 | 3.00E-133 | Predicted inosine-uridine preferring nucleoside hydrolase |
| nr | gi|672176945|ref|XP_008808553.1| | 1.06E-176 | PREDICTED: probable uridine nucleosidase 1 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q6ZJ05|URH1_ORYSJ | 3.00E-169 | Probable uridine nucleosidase 1 |
| trEMBL | tr|M0TNH3|M0TNH3_MUSAM | 2.00E-173 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P07700_001} |
| TAIR | AT2G36310 | 3.00E-133 | uridine-ribohydrolase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 3873210 | 3910638 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017367
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01156.18 | IU_nuc_hydro | 25 | 325 | 7.20E-73 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01240 | URH1 | Metabolic pathways | map01100 |
| Pyrimidine metabolism | map00240 | ||
| Nicotinate and nicotinamide metabolism | map00760 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.140 |
| SRR2545915 | Juvenile tuber | 13.440 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.220 |
| SRR5643514 | five period of Gastrodia elata | 8.510 | |
| SRR5643515 | five period of Gastrodia elata | 7.870 | |
| SRR5643524 | five period of Gastrodia elata | 7.420 | |
| SRR5643525 | five period of Gastrodia elata | 35.360 | |
| SRR5643528 | five period of Gastrodia elata | 42.480 | |
| SRR5643658 | five period of Gastrodia elata | 35.730 | |
| SRR5643659 | five period of Gastrodia elata | 2.490 | |
| SRR5643660 | five period of Gastrodia elata | 2.450 | |
| SRR5643661 | five period of Gastrodia elata | 1.510 | |
| SRR5643662 | five period of Gastrodia elata | 0.630 | |
| SRR5643663 | five period of Gastrodia elata | 0.650 | |
| SRR5643664 | five period of Gastrodia elata | 1.310 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.790 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 13.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 18.580 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.820 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.720 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.340 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.610 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.610 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.44 |
| Juven | Juvenile tuber | 1.91 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.09 | |
| Mother_Juven | Mother tuber of Juvenile | 7.58 |