Detail information of GWHGAAEX017370/evm.TU.scaffold_80.191
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|320102538|ref|YP_004178129.1| | 4.00E-18 | serine/threonine protein kinase [Isosphaera pallida ATCC 43644] |
| KOG | KOG0610 | 0 | Putative serine/threonine protein kinase |
| nr | gi|743764083|ref|XP_010912246.1| | 0 | PREDICTED: serine/threonine-protein kinase D6PKL1-like [Elaeis guineensis] |
| Swissprot | tr|Q9LFA2|KIPK_ARATH | 0 | Serine/threonine-protein kinase KIPK |
| trEMBL | tr|I1IIF4|I1IIF4_BRADI | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G07430.1} |
| TAIR | AT3G52890 | 0 | KCBP-interacting protein kinase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 3996261 | 4002908 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017370
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 385 | 533 | 1.80E-35 |
| PF00069.24 | Pkinase | 613 | 716 | 1.10E-22 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.640 |
| SRR2545915 | Juvenile tuber | 8.370 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 18.160 |
| SRR5643514 | five period of Gastrodia elata | 14.470 | |
| SRR5643515 | five period of Gastrodia elata | 10.710 | |
| SRR5643524 | five period of Gastrodia elata | 15.210 | |
| SRR5643525 | five period of Gastrodia elata | 19.390 | |
| SRR5643528 | five period of Gastrodia elata | 17.260 | |
| SRR5643658 | five period of Gastrodia elata | 21.510 | |
| SRR5643659 | five period of Gastrodia elata | 8.260 | |
| SRR5643660 | five period of Gastrodia elata | 8.770 | |
| SRR5643661 | five period of Gastrodia elata | 7.510 | |
| SRR5643662 | five period of Gastrodia elata | 5.660 | |
| SRR5643663 | five period of Gastrodia elata | 3.140 | |
| SRR5643664 | five period of Gastrodia elata | 5.190 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.650 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.780 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.630 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.200 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.010 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.620 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.480 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.300 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.300 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.46 |
| Juven | Juvenile tuber | 7.51 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.21 | |
| Mother_Juven | Mother tuber of Juvenile | 6.25 |