Detail information of GWHGAAEX017371/evm.TU.scaffold_80.192


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|166362769|ref|YP_001655042.1|1.00E-51low molecular weight phosphotyrosine protein phosphatase [Microcystis aeruginosa NIES-843]
KOGKOG32177.00E-82Protein tyrosine phosphatase
nrgi|643725787|gb|KDP34708.1|9.30E-96hypothetical protein JCGZ_10913 [Jatropha curcas]
trEMBLtr|A0A067KIB8|A0A067KIB8_JATCU3.00E-96Uncharacterized protein {ECO:0000313|EMBL:KDP34708.1}
TAIRAT3G446207.00E-82protein tyrosine phosphatases;protein tyrosine phosphatases

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008440037314009823+
Transcript Sequence

Network for GWHGAAEX017371

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01451.20LMWPc862391.50E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01104E3.1.3.48 Two-component system map02020

Gene Ontology

GO term OntologyName
GO:0006470Biological Processprotein dephosphorylation
GO:0004725Molecular Functionprotein tyrosine phosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.270
SRR2545915Juvenile tuber29.300
SRP108465SRR5643513five period of Gastrodia elata17.700
SRR5643514five period of Gastrodia elata20.570
SRR5643515five period of Gastrodia elata19.850
SRR5643524five period of Gastrodia elata22.130
SRR5643525five period of Gastrodia elata33.050
SRR5643528five period of Gastrodia elata31.770
SRR5643658five period of Gastrodia elata31.710
SRR5643659five period of Gastrodia elata21.200
SRR5643660five period of Gastrodia elata22.670
SRR5643661five period of Gastrodia elata24.680
SRR5643662five period of Gastrodia elata36.360
SRR5643663five period of Gastrodia elata27.180
SRR5643664five period of Gastrodia elata31.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.890
SRR6049655Rhizomagastrodiae_C368-T10_good_117.010
SRR6049656Rhizomagastrodiae_C368-T07_good_120.680
SRR6049657Rhizomagastrodiae_C368-T07_good_115.510
SRR6049658Rhizomagastrodiae_C368-T04_good_111.890
SRR6049659Rhizomagastrodiae_C368-T04_good_113.010
SRR6049660Rhizomagastrodiae_C368-T01_good_115.680
SRR6049661Rhizomagastrodiae_C368-T04_good_115.270
SRR6049662Rhizomagastrodiae_C368-T01_good_115.770
SRR6049663Rhizomagastrodiae_C368-T01_good_117.810
SRR6049664Rhizomagastrodiae_C368-T10_good_123.400
SRR6049665Rhizomagastrodiae_C368-T10_good_123.400
SRP279888GastroGastrodia elata tuber 27.57
JuvenJuvenile tuber23.07
Mother_GastroMother tuber of Gastrodia elata 32.92
Mother_JuvenMother tuber of Juvenile 23.82