Detail information of GWHGAAEX017374/evm.TU.scaffold_80.195
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|357404671|ref|YP_004916595.1| | 4.00E-79 | delta(14)-sterol reductase [Methylomicrobium alcaliphilum 20Z] |
| KOG | KOG1435 | 1.00E-135 | Sterol reductase/lamin B receptor |
| nr | gi|672195529|ref|XP_008776565.1| | 0 | PREDICTED: delta(14)-sterol reductase [Phoenix dactylifera] |
| Swissprot | tr|Q9LDR4|ERG24_ARATH | 3.00E-179 | Delta(14)-sterol reductase |
| trEMBL | tr|V4UV28|V4UV28_9ROSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESR43544.1} |
| TAIR | AT3G52940 | 1.00E-135 | Ergosterol biosynthesis ERG4/ERG24 family |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 4042007 | 4063553 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017374
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01222.16 | ERG4_ERG24 | 16 | 384 | 4.10E-89 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00222 | TM7SF2, ERG24 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of antibiotics | map01130 | ||
| Steroid biosynthesis | map00100 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 31.210 |
| SRR2545915 | Juvenile tuber | 34.200 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.890 |
| SRR5643514 | five period of Gastrodia elata | 27.260 | |
| SRR5643515 | five period of Gastrodia elata | 26.500 | |
| SRR5643524 | five period of Gastrodia elata | 26.420 | |
| SRR5643525 | five period of Gastrodia elata | 35.940 | |
| SRR5643528 | five period of Gastrodia elata | 32.790 | |
| SRR5643658 | five period of Gastrodia elata | 33.220 | |
| SRR5643659 | five period of Gastrodia elata | 27.000 | |
| SRR5643660 | five period of Gastrodia elata | 31.280 | |
| SRR5643661 | five period of Gastrodia elata | 27.650 | |
| SRR5643662 | five period of Gastrodia elata | 27.880 | |
| SRR5643663 | five period of Gastrodia elata | 26.960 | |
| SRR5643664 | five period of Gastrodia elata | 31.870 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.500 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.520 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.430 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 26.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 23.820 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.970 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.170 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.800 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.840 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.930 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.930 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 33.91 |
| Juven | Juvenile tuber | 27.93 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.52 | |
| Mother_Juven | Mother tuber of Juvenile | 32.98 |