Detail information of GWHGAAEX017377/evm.TU.scaffold_80.198
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 2.00E-32 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 1.00E-137 | Serine/threonine protein kinase |
| nr | gi|743846088|ref|XP_010938746.1| | 2.66E-177 | PREDICTED: serine/threonine-protein kinase CDL1-like [Elaeis guineensis] |
| Swissprot | tr|Q8RWW0|ALE2_ARATH | 7.00E-90 | Receptor-like serine/threonine-protein kinase ALE2 (Precursor) |
| trEMBL | tr|V7BFU0|V7BFU0_PHAVU | 2.00E-163 | Uncharacterized protein {ECO:0000313|EMBL:ESW16744.1} |
| TAIR | AT3G58690 | 1.00E-137 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 4089563 | 4091871 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017377
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 110 | 371 | 4.30E-38 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_Extensin |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.780 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.430 |
| SRR5643514 | five period of Gastrodia elata | 0.430 | |
| SRR5643515 | five period of Gastrodia elata | 1.750 | |
| SRR5643524 | five period of Gastrodia elata | 0.420 | |
| SRR5643525 | five period of Gastrodia elata | 0.070 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.110 | |
| SRR5643659 | five period of Gastrodia elata | 0.410 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 0.130 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.620 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.730 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.220 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.220 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.450 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.450 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.00 |