Detail information of GWHGAAEX017379/evm.TU.scaffold_80.200


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15714.00E-85Predicted E3 ubiquitin ligase
nrgi|293331393|ref|NP_001168045.1|6.57E-104hypothetical protein [Zea mays]
Swissprottr|Q93ZT5|EDL3_ARATH1.00E-86EID1-like F-box protein 3
trEMBLtr|C0HIR5|C0HIR5_MAIZE2.00E-104Uncharacterized protein {ECO:0000313|EMBL:ACN26918.1, ECO:0000313|EnsemblPlants:GRMZM2G073324_P01}
TAIRAT3G630604.00E-85EID1-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008441854554186692-
Transcript Sequence

Network for GWHGAAEX017379

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.550
SRR2545915Juvenile tuber12.470
SRP108465SRR5643513five period of Gastrodia elata5.380
SRR5643514five period of Gastrodia elata3.300
SRR5643515five period of Gastrodia elata13.370
SRR5643524five period of Gastrodia elata2.400
SRR5643525five period of Gastrodia elata197.500
SRR5643528five period of Gastrodia elata55.780
SRR5643658five period of Gastrodia elata226.190
SRR5643659five period of Gastrodia elata58.850
SRR5643660five period of Gastrodia elata35.610
SRR5643661five period of Gastrodia elata91.530
SRR5643662five period of Gastrodia elata42.150
SRR5643663five period of Gastrodia elata42.420
SRR5643664five period of Gastrodia elata168.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.850
SRR6049655Rhizomagastrodiae_C368-T10_good_110.870
SRR6049656Rhizomagastrodiae_C368-T07_good_111.160
SRR6049657Rhizomagastrodiae_C368-T07_good_113.610
SRR6049658Rhizomagastrodiae_C368-T04_good_110.810
SRR6049659Rhizomagastrodiae_C368-T04_good_19.230
SRR6049660Rhizomagastrodiae_C368-T01_good_135.910
SRR6049661Rhizomagastrodiae_C368-T04_good_117.290
SRR6049662Rhizomagastrodiae_C368-T01_good_17.890
SRR6049663Rhizomagastrodiae_C368-T01_good_116.610
SRR6049664Rhizomagastrodiae_C368-T10_good_16.400
SRR6049665Rhizomagastrodiae_C368-T10_good_16.400
SRP279888GastroGastrodia elata tuber 17.05
JuvenJuvenile tuber6.39
Mother_GastroMother tuber of Gastrodia elata 33.61
Mother_JuvenMother tuber of Juvenile 8.41