Detail information of GWHGAAEX017407/evm.TU.scaffold_80.235
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1187 | 6.00E-57 | Serine/threonine protein kinase |
| nr | gi|695013282|ref|XP_009393419.1| | 1.82E-69 | PREDICTED: probable serine/threonine-protein kinase At1g01540 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q3EDL4|Y1154_ARATH | 2.00E-57 | Probable serine/threonine-protein kinase At1g01540 |
| trEMBL | tr|M0SGV9|M0SGV9_MUSAM | 2.00E-70 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P22430_001} |
| TAIR | AT1G01540 | 6.00E-57 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000084 | 4569159 | 4595285 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017407
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 119 | 223 | 7.20E-09 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-V |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.130 |
| SRR2545915 | Juvenile tuber | 10.300 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.780 |
| SRR5643514 | five period of Gastrodia elata | 8.390 | |
| SRR5643515 | five period of Gastrodia elata | 7.170 | |
| SRR5643524 | five period of Gastrodia elata | 6.050 | |
| SRR5643525 | five period of Gastrodia elata | 5.910 | |
| SRR5643528 | five period of Gastrodia elata | 3.080 | |
| SRR5643658 | five period of Gastrodia elata | 2.900 | |
| SRR5643659 | five period of Gastrodia elata | 5.480 | |
| SRR5643660 | five period of Gastrodia elata | 5.430 | |
| SRR5643661 | five period of Gastrodia elata | 7.110 | |
| SRR5643662 | five period of Gastrodia elata | 5.230 | |
| SRR5643663 | five period of Gastrodia elata | 4.990 | |
| SRR5643664 | five period of Gastrodia elata | 3.970 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.010 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.780 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.820 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.340 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 10.460 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.800 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.690 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.560 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.530 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.560 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.39 |
| Juven | Juvenile tuber | 5.78 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.30 | |
| Mother_Juven | Mother tuber of Juvenile | 3.05 |