Gene detail

Detail information of GWHGAAEX017409/evm.TU.scaffold_80.240

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1471	2.00E-152	Phosphatidylinositol transfer protein SEC14 and related proteins
nr	gi\|695035012\|ref\|XP_009404974.1\|	0	PREDICTED: patellin-3-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9M0R2\|PATL5_ARATH	4.00E-153	Patellin-5
trEMBL	tr\|M0T876\|M0T876_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P18780_001}
TAIR	AT1G72160	2.00E-152	Sec14p-like phosphatidylinositol transfer family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000084	4627819	4633092	+

Transcript Sequence
>GWHTAAEX017409 GTTTGGCGCACCGCTGGCCTCGTCCTCTGACAGGCTGGTCTTCCTTGTTTATCCTCGTCTTCCAACTCTTCAAATAACTTCTCCTCTTTCAAAATCCCTTCACCCTACGCTACACTCACCTCCTTCTCCGCACTCTTTTCTATATAAAAGTCTGCACTCTCTCTCCTTCCACTCCCAAACCCTCCATCCGCTTCTCTTTCTCATCTTCCCTCTCAGATATGGCGGTGGAAACGGAGAAGAAAACTATCGATTCTGCTCCGGCGGAGGAGGTTGTGGTGCCAGAGGCGAAAACAGAGGAAAAGGCTCCGCCTCTGCTGCAGACCCTTCTGTCGGAAGAGGAGCCCATGAAGCCCAAAGAGGAGGCTTCGGTGGCAGTAACTCCGACGGCGGAGGCTCCGGCGGAGGCTGTGATACAGCAGTCTGTTTCCTTCAAGGAGGAGAGCAACCTCGTCGGTGATCTTCCCGAGCATGAGAAGAAAGCCCTCGATGAGTTTAAACAGCTTATCCAAACTGCCCTTTCGAACAACGAATTCCGCCCCCCGCCGCCGCCGCCGCCGCCTGCTCCTCCTAAATCAGATGAACCCTCCGATCCCGCCAAGATTGAGGTTCCGGCGCCGCCGGCTGAATCCGCAGCACCTTCCGCTCCTAAAACAGAAAACGACGCTGCTTCCGTTGAGCCGCTTCCTAAGCCGGAAGAAACTTCTGCCGCGGCCGCTCCGGAAGCATTAAAAGCCGAAGAGTTCGTTGAAGTTAAGGCTGTGGTGGTTGACGAGGATGGGGCAAAGACTGTCGAGGCTATTGAGGAAACCGTCGTTTCTGTAACCCCGCCACCCTCCGTTTCTGTACAAGTTGCTACCACTGCAGAAAGAGAGACTGTGAAAGAGCCGGATTCGAAGACAGAAGCGCCCGTTGCTGTGGTGCCGCCATCGGAGGAGCTTATATGGGGCGTTCCTCTTCTCGGAGATGAAAAGAGTGATACCGTCCTTCTGAAGTTTCTCCGGGCCAGGGACTTCAAGGTGAAGGATGCTCTGACCATGATCAAGAATGCTGTGATTTGGAGAAAACAGTTTGCGATTGACAGCCTTCTGGAAGAGGATCTGGCCGTCCCAGAGCTTGAGAAGGTGGTGTTCTACCATGGCCATGATAAGGAGGGCCATCCGGTTTGCTACAACGTCTATGGAGAGTTCCAGAACCAGGAGCTCTACGGCAAGGCCTTTGGCGATGAAGAGAAGAGGGAAAAGTTTTTGAGGTGGAGAATTCAGTTCCTGGAGAAGGGAATCAGGCAGCACCTTGATTTTACTCCTAAAGGAGTTTGTACTATGGTTCAAGTTACTGATCTCAAGAGCGTTCCTGGTCCGGGAAGGAGAGAACTCCGGCAAGCCACCAAGAAGGCTTTAGCCCTCCTCCAGGATAATTATCCTGAGCTCGTTGCCAAGCAGGTGTTTATAAATGTTCCATGGTGGTACCTTGCCTACAATCGAATGATGAGTCCATTCTTTACACAGAGGACTAAGAGCAAATTTGTTTTTGCTGGTCCTTCGAAGTCTGCTGAAACTCTTTTCAGATACATAGCCCCGGAGCATGTTCCTGTTCAATATGGAGGGCTGAGCACAGCTGATGATTCAGATTTCACTACTACTGATGTTGTTACTGAAGTCATTGTTAAACCTTCAAGCAAGCATGTCATTGAATTGCCTTCTACTGAGCCAACTCTTCTTGTTTGGGAGCTTCGAGTATTAGGATGGGATGTAACTCACAGTACCGAATTCGTTCCCATCGCCGAGGATTCTTATACTGTAGTCGTGCAGAAGGCCAGGAAGTTCTCAGCGACTGATGAACCATATGTGAAGAATAGCTTTAAGGTTGGTGAACCTGGAAAGGTTATTTTGAACATCGACAATGCTACTACCAAGAAGAAGAAGCTTCTGTATAGATCCAAAACTAAGAGCACAACTGAATCTGCTTGAGGTGTGATCTCTTTTGCTGCATAAATTGGGTCAGGAACTCTGAAAAAGTTAGATAAAGGAAGTAAATGGTTGGAGTGATTATGATTAAAGGTTGATTTTTTTAATGTTCTTTCCTTGATTGGGATCTCTTAAATGGTTTAATTTTATGTTTTATTAATGTTTTTTGGGTTGTGTTGGTTTGTTACAGTACAAAAATGGAAGGTGTGTTCTTTGAGGGATATAACGGGTGGATTGGGGGGGTTCTGCTACTTGATATTTCTTTTCTGTAAATCCTATGAGACTTGATCTTTGTGGAATATTCTCTTGTTTTTCAGTATTTACTGTCACTATTAGACAACTTGGCCATGTTTGGCATCTTCCTTCTGTACTCTTTTTGCCTGTCTTTTTTTTCTCTTGTTTTTTCATTCTTTGCTGACTAGATACTTTATGAGTCTTACTGATACTTTTCAATCATGCGGTCTCCCACTCCAGGTTCCTCAGGATTTAAACTGCTCTAATCATTATCTCAAGTGAAATAAAGCGGACAAGTAGCATGCATGCTTTTAGGGATTTTTTAGTGTACTTGTTCACAAATTGAATCTAGGAAAATAAATCCAGCCGCTGAGTTATAGGAGGCCGCTGCATTAAACCGGACTTTTGTGTTATTGCCATTATGTGAATCACATTTCATAATCACTGCTGCTCAAGTTAATGAAGACAGCAAAGAAACAATACTTCCAAGTTTGTTTCGTTATTTTTTTGTAAATCTGTTCTTATGGGAAGTTTATGAGGACTGGAAATTGAGCAAAAGAAGCAAGTTGGAATCTAGAGTTTCAAATACTAACTGCTCAAGAACCCTTCTAGGAGTGAAAATGGATTTCATCTCTCACGTTTTCCCCATTTTTAATATTTTCACGGAAAATTCAAAGTTATTCTCTGGGCTTCTTTCTTTGAGTTTTAAAATTTGAGAGGCTGTTATTACTTGCAGTTAACAATTTTTTTTTTGTGCATTTATTTATTTACTTTGCGTGTTTGATTATGAAATTTTTAGATAAAGTTGGAAGCTTTTTTGTGCTATCATACAATGCATTCATCTCCTTCTTGATACTTTTCCCCTGCACCACCGCTGGCCTTCTGCTCCGAACCCATCATCTTTCTTTTGTTTGTATTAAAGCTGGCGTTACAAATTTATAGCCTGCTACATTTTTAGCATAGGCGAGCTGTTCCATGATTAATTTTATGATTTATTTTATATTCTTGGCATATTCTTGTTGTCTCAGGTGGGGTCAGTTTACTTATAATATTGTGTGTATTAGTATTATTAGTTTTTACTGCTGCCGAGTTGATTCTAATCCAGGTTTTAGAAGCCGCATCAAACATATCTATAAACCACGACAACATAGCTGAACTCTTAAATGAGATTAGACGAAAGCTTTTCATTTTATTATAAAAAGTTTGAGGAGTCATTATAGTCCAGGACATTCAGGGCATAAAATAATGTTTATGTTAAGATAGCCTGAGAGTGGTTTTGTCCCACATCTTGAAAAGAGAGTGTTGGTTGGTTTGGACCTCCAAGCTTAAGCTTTTGAGTGAAAGTGCGGTTTAACTATTGGTGATGTAGCCCAATTTTTTGACTTTGTCCCTCGTATGGCTCACTTCTAACACTTCAAATTCAAGCAAGTTTAATGTAACCCAACAGAAGGGAAAGCATTTGATTTCGGAGAATTTTAAGTTAGGTCATACAGTGCACAGTTTAAAATAAATTCGGCAGAGTTTATATTAGAATATAAGGTGTCACACATTTAGCTGGGCACCCCTATTAACAAATGTCCCACTTGTATTTGCCACCTCTTAAGTCTAACTCAAAAAGTGTCCAGCTTGTCATCTTCATTTTAATTGCATAATACATGGAGCCTTCTTTTATTGCTTCTTCTAAAACCCAAACACTTGTTGGCCCAAAAAATGATCAAAAAAGAGTTGTCAAGGTTGTCCGGCATCATTGCACACCCGTATAACCAACTGCTTCGAAGGTTCTTATTTATTATATTTTATGTTATGACAGATTGTCATTTAGGACCTGTTTGGAATTTTCTTTAGTGCGGATTTTCTTAAATATTTTCGCTGTTCTGTGTGGATAGAAACTTCTTTGTTTCAAAACAAAATGCTTTTTTCATGGATGTTTAATAATGAACTCATTCTTGCTCGTATAGGAAAGTAATGTCCATCCATATTTTCACCCAAATGGGGATTTGTTACAAGAACTTCAGTTTACTTGCATCAAAGTTAGTTTGGCAGTTGAATTTTTGTCAAATAATAACATCTTATATGCAGCAGCTTAAAAGAATAGTTCTTCACATATCATAATTATTAAACATTGGTATAGATATTTAAAAAAGAGGCTAATTTCAATGAGAGCATGTAACTTTATCCTTTCTTATTCGAGTTTATTTAATCCTAAAACGATGATTGAGTGCAAGAGTGTGCTAATGTTATTATGTATGCACAGCGACTATTCATAGGGATTCATTTTAGTGATAAGTCATGAGTTGCTGTCATGCTTTTGTTTTAAATTCTTTCATACAGTAGTCTTTTATGCAGAAGAGAAACGGGGGCATCTTTACAAATTCCAGATGACTAAGCCATTCAGTCATGATCAGTTGATGTTACTTGTAACTACTAATATTAGATTTCAATCATTTTTTTTCCATTAGAATAATGCAAGGATATATTAGGAGGATAAAGCTATGCAGTTTAAGAAAGTCAATCAAATCCATATGATAAATCTCAGGTTAAATGAGTCAAGAGCAAGCCTCTTCTTGGCTAGCTGAGGGGCCAATAAAAGGACAC

Network for GWHGAAEX017409

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03765.14	CRAL_TRIO_N	238	276	7.50E-09
PF00650.19	CRAL_TRIO	301	462	1.20E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	140.850
SRP064423	SRR2545915	Juvenile tuber	105.160
SRP108465	SRR5643513	five period of Gastrodia elata	122.010
	SRR5643514	five period of Gastrodia elata	92.380
	SRR5643515	five period of Gastrodia elata	117.090
	SRR5643524	five period of Gastrodia elata	91.840
	SRR5643525	five period of Gastrodia elata	317.460
	SRR5643528	five period of Gastrodia elata	268.950
	SRR5643658	five period of Gastrodia elata	526.430
	SRR5643659	five period of Gastrodia elata	65.220
	SRR5643660	five period of Gastrodia elata	80.040
	SRR5643661	five period of Gastrodia elata	59.300
	SRR5643662	five period of Gastrodia elata	47.970
	SRR5643663	five period of Gastrodia elata	39.530
	SRR5643664	five period of Gastrodia elata	67.330
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	198.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	172.730
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	224.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	254.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	260.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	355.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	225.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	286.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	148.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	160.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	174.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	174.340
SRP279888	Gastro	Gastrodia elata tuber	87.25
	Juven	Juvenile tuber	116.34
	Mother_Gastro	Mother tuber of Gastrodia elata	146.78
	Mother_Juven	Mother tuber of Juvenile	126.70