Gene detail

Detail information of GWHGAAEX017416/evm.TU.scaffold_81.6

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521460440\|ref\|YP_008147096.1\|	6.00E-18	hypothetical protein SCE1572_03165 [Sorangium cellulosum So0157-2]
KOG	KOG1530	3.00E-42	Rhodanese-related sulfurtransferase
nr	gi\|672113640\|ref\|XP_008811900.1\|	1.29E-54	PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Phoenix dactylifera]
Swissprot	tr\|Q39129\|STR16_ARATH	1.00E-42	Thiosulfate sulfurtransferase 16, chloroplastic
trEMBL	tr\|M0TW17\|M0TW17_MUSAM	5.00E-52	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P34150_001}
TAIR	AT5G66040	3.00E-42	sulfurtransferase protein 16

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000087	450362	483181	+

Transcript Sequence
>GWHTAAEX017416 GTTTTTTGTTTGGCGTCTGAGGATTAGTTCCGAGTAGGCAAAAAAGAAAAAGTTGTCTAATGGCCGTTTTGCCTCGCTTGGCTCTCCCCATTGCCCACTTCGTTACAACAGTCAAGAGGATTCATTTGCCGCAGCCGGTTATGCTTCTCTCATTGAAACAGTTCTCACACAGGCGATATGTGTTACCGCCAGAAAGCAGCCGCCGGAAGTTCGTCCGGTCGATGGCCACCGGCGAGGAAAACGAGGCGGTGGTTCCGTCGTCTGTGTCTGTTCTTGTTGCGCATGAGCTCCTGCTGGCCGGGCACCGTTATCTCGATGTCAGAACAGTTGCTGAGTTCAATGCTGGCCATGTGGTGGGGGCAACGAACATCCCTTTTATGTTAAATGCTGAGTCAGGGATGACAAAAAATCTGAACTTCTTGGATGAAGTCTCAAAAACTTTTGGAAAGGATGATGAAATATTGATTGGCTGTCTATTTGGGAAGAGGTCATTCTTGGCTGCATCTGAGCTTTCATCTGTGGGATTTACGAGCTTGACTAATGTTGCAGGAGGCTATGCATCATGGGTGCAGAATAACCTTCCCATTGAGTCTTAATTTGTGGTGGGAGCAGGCAATACTCAATTTTAAAGTGATTAGTTCTTATAATTATACCCTGCAAAGTTAATTTTCTTATTTTTGTTTGTTTCATTAAAACATTGGATAACAAAAGAGGTTGTGCCTCTCTTTCTCTGTATATATATATAATGTGCTATGTATTTCATTTCATATATACAATTACATAATGTCATCCAAGTCTCTAGCTTCAATCTATGGTCTTCCTAAAGGATTCATTTCATCTTGATTAGCATTCATCATCTGGTAAGCAATTTGAAATGCTTGGAGTTGATCTTTTGCTAAAATGAACTAAAAATTAAATCTCAAAATAAATGTTAGTTAGTTTTAAATGCAAAAATAATTTTTATGGTTTGTGCCCATCAAAATTTAATAAGACCGTTAGATCTAAATTGTCCATTTAAGCATAGTAAAATAGAGCCCACTTATTACTTAGAATTAAATAAGATGTACCAGTTAGAGCATATAGTGAAACCTATCATTACTTTATTTGATGACTAAGATAGCCCGAGATCTTTTCACATGCCTTTGGAGACACCGATTAAGCTCTCCAACCCTACTATTATGGGAGGTTCTCCTTTCCTTGAGCAATATATCAGGATATTTTCCCAATGCTTGTAGTTTCAATCTATTGCTAAGGAGACCTTACCTCTAGCTCTACCATCCCTCCACAAATGAGTAAACATGTAGATCATGTGCTCAATGTGCATCATCTTAAGCTTAAGCCTTAGCCATTTGTAGGAACCACTACCCATAATGATGCAGAAGATTGACTCAAGAAGATAGAGAAGAAATTGGTTAGTATAAATTGTTCAATGGAGTGCATCATAAGATTAGTTACATGTGTTTGGCAGAGCAGCAAAATAATTGTGGCTGTTAACTATGGACACCAAATTTAGGGGTCTAGCTATAGCGATCATAAATTGGGTTGCTTATATCTCAATTCTCTTGACAAATTATTTTTAGATCCAACATTTCTTCCCATATTCAATTTAGTTAAATCTTTTTCTAATTCATCATATGAGGGATATGTACATGAGATTCAAATTTAGATTCATAAAAAACACAAATTAATTCTTCAATCTATAACTTTTTCTTATTAAAAACTCTATATGCATAGCTTGAGGAGGAGTATTCAATAAATAAACCTTATATGTTTTGTACGATGAAAAATAACTTGATGATGAACCTTGAGCCACCAAACTAGCCCAAGTGTGCGTTCACTCTGGTAGAGGCTCATAAGGATCACGAGGTCACATTAAGTACCCTTTTATTTATGATTGTGCCTTATTTATACAACTATGGGGATAGCCACTCATTTAGCTAGCTAAGGAGCTTTTGTTCCTATTAAACTACTTTCAAGAACCCACCTTTAAGTTAATGCCCATTATGATTATACATGCTCTAAACCCTTGCCATCAATATTTTTCATTTGAGTTTATTCTTTTACTCATCTCGAATTTCGATATCGGATTGGCTAAGTTGTAACAACACATTAGTAGATTGTGTGAAGAAGCACGTTCATTTAACAATAGGTGGTAAGGTTGTAGTTTTCATCGATAGGAGAAGCCTGCTATCCTCCATCATCAGCTCCATCAGAGCAAAGAAGATCATTGAGAAGGGTTAGGATCTCTCTTAATAACCATGATGAGATTCAAGAAGCCGATGACTACACTAGTATACACTGCTATAGCGCGTAACTTTCCTGATGTCTTGCCCAAGGATATACCTGGACAATCCCCTATTGAGATGAACTTTTTCATTGAGCATGTACCTCACACTTAGTCTTCTTCAAAGGCCTTGTATAGAATAGCTCCTAAGAAGTTATAAGAGTTACATGATTCATATCCAAGAGATGGATCATAGATTCATTTGTCCTAACTTATTACTTTGAGGAGCAACAATATTATTAGTTAAGAAAAAGATGAAACTCGTAGATTGTGAGTAGAACTTAATAAGATGACTGTTAAGAATCGTTATCTCCTACGACATATATATGCCTTAATACTAATCATATTTTACAATGGGTACCAAGACATCAAAATTTAATAGGAAAATGCTACACTTATACCACTATATACACTATCAATGAATTTTTTTTATATATAGGCTTAAGCGATAAGTGCATTGCACTAATCATATGCTTACACATTAAATTAACATATTATTTATATTTTATTGTGTATATGTTAATGTAAGTGCAATAAAGTTCAATTTAATATGTTTGTCCTGCTACTCGTTTCAAAACCTCGTCCCTTCTCCAATCCAATCTCTATCACGAGAGGCAACATCTCCCGCCTCGTCGATGCCTTTTGCAGGCAAACGTTTCTATTACTATTGACATCAGGTATGTGTTCCCCCTGGAACTTCTCTCCAGCCGAGCTTTAATTTTCTTTTACTTTTGAAAAATTAACAATCGTGCTTGTTGAATGAGATTCACTTCTTGAAATAGGCCTTGTGATTCTCTGCGCTTGATGGGATTGTCGACTTATACCATTAGTTTTTTTGCTTGAAATAGTGTTGGCGTTACTGGCCCATGATCACGTTGTTGTCAATGACGAGGAAGACCTGGAACAATGCTTCTTTTATGGATTTCACAAGATTTGAGAAGATTTGGGAGAGTTTGGAAGAGAAGAGGTGATTTAGAATAACTATACTCAGTGTTGGCACTTCCTTTGCGCATGCCTTAGTTTGGTGACAAAACTTGTGTTGTGCTAGAGAATTATGGGCGGGCTATGTGCCAGCTAAAGTCAGGTAAATTACACAAGAAATATACTAATATGAAGCAACCAGGTATACAAAAGTGTGACTAGTCTTTGTTAATGCCTTGTAATGCTGATGAATCATTCTTATGATGACCTATAATCATTTATACGGTCTCGTATTGTTAAATTATTGATGTAGACAATCGTTTGTAACAGCTGATTGTGATCACACTTAATTGAAATCTGTCATTATAAATTGTTGCATTTTAATGAATTTAAAGGGA

Network for GWHGAAEX017416

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00581.19	Rhodanese	84	171	6.40E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.360
SRP064423	SRR2545915	Juvenile tuber	7.720
SRP108465	SRR5643513	five period of Gastrodia elata	7.080
	SRR5643514	five period of Gastrodia elata	9.670
	SRR5643515	five period of Gastrodia elata	8.960
	SRR5643524	five period of Gastrodia elata	9.840
	SRR5643525	five period of Gastrodia elata	10.310
	SRR5643528	five period of Gastrodia elata	10.390
	SRR5643658	five period of Gastrodia elata	14.460
	SRR5643659	five period of Gastrodia elata	8.000
	SRR5643660	five period of Gastrodia elata	8.450
	SRR5643661	five period of Gastrodia elata	8.390
	SRR5643662	five period of Gastrodia elata	9.130
	SRR5643663	five period of Gastrodia elata	8.720
	SRR5643664	five period of Gastrodia elata	8.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.580
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.910
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.310
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.280
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.800
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.930
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.930
SRP279888	Gastro	Gastrodia elata tuber	7.75
	Juven	Juvenile tuber	10.49
	Mother_Gastro	Mother tuber of Gastrodia elata	11.35
	Mother_Juven	Mother tuber of Juvenile	10.04