Detail information of GWHGAAEX017421/evm.TU.scaffold_81.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20274.00E-79Spindle pole body protein
nrgi|743833287|ref|XP_010935225.1|6.24E-105PREDICTED: IST1-like protein [Elaeis guineensis]
trEMBLtr|F6I2D6|F6I2D6_VITVI3.00E-82Putative uncharacterized protein {ECO:0000313|EMBL:CCB61103.1} (Fragment)
TAIRAT4G357304.00E-79Regulator of Vps4 activity in the MVB pathway protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000087594791596680-
Transcript Sequence

Network for GWHGAAEX017421

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03398.13Ist121086.60E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19476IST1 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.320
SRR2545915Juvenile tuber1.370
SRP108465SRR5643513five period of Gastrodia elata3.790
SRR5643514five period of Gastrodia elata4.810
SRR5643515five period of Gastrodia elata4.440
SRR5643524five period of Gastrodia elata4.380
SRR5643525five period of Gastrodia elata4.060
SRR5643528five period of Gastrodia elata3.710
SRR5643658five period of Gastrodia elata4.840
SRR5643659five period of Gastrodia elata2.820
SRR5643660five period of Gastrodia elata1.990
SRR5643661five period of Gastrodia elata2.340
SRR5643662five period of Gastrodia elata3.170
SRR5643663five period of Gastrodia elata2.390
SRR5643664five period of Gastrodia elata2.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.780
SRR6049655Rhizomagastrodiae_C368-T10_good_17.080
SRR6049656Rhizomagastrodiae_C368-T07_good_12.050
SRR6049657Rhizomagastrodiae_C368-T07_good_12.660
SRR6049658Rhizomagastrodiae_C368-T04_good_12.510
SRR6049659Rhizomagastrodiae_C368-T04_good_12.500
SRR6049660Rhizomagastrodiae_C368-T01_good_11.470
SRR6049661Rhizomagastrodiae_C368-T04_good_12.480
SRR6049662Rhizomagastrodiae_C368-T01_good_13.370
SRR6049663Rhizomagastrodiae_C368-T01_good_12.250
SRR6049664Rhizomagastrodiae_C368-T10_good_14.970
SRR6049665Rhizomagastrodiae_C368-T10_good_14.970
SRP279888GastroGastrodia elata tuber 2.99
JuvenJuvenile tuber2.50
Mother_GastroMother tuber of Gastrodia elata 11.83
Mother_JuvenMother tuber of Juvenile 4.93