Gene detail

Detail information of GWHGAAEX017428/evm.TU.scaffold_81.22

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000087	866334	878754	+

Transcript Sequence
>GWHTAAEX017428 AGCTCTAAATCTGGCCCTAAATTGGTAGATTGTAATTATATATATATATTAATTTCATTCTTACACATTTTTAGCTATTTATTTGGTATTCATAGAGAAAGGAAGAGAGTTGGGTTTGATAGTTGATAATTTGATAGCTCATTCAAGACCAAGTCCCTAGTGAGAAAGCAATTTTGATGCTACTTACTATTTTTAGCACATAGTTATACTTCAATTTTCTTAAATTTTATCTTGATGGTCATATGTGAAATCTAAAAATATTAAAAGTGAATTAAAATAATATCTTTTTCTTAAGTTGTGCTTTTGTAAGTCAAATATATGACTAGTAAATTTTAAATTATTGATCTAATTAATATAATGTTTATCAATATATATAAAGATTGAGGAGAATGTGAGTGAGAAGCAAGCTCAAGATAACTGTAGCAAAGAGAAAACTGTTGATGAGTTAAAGCTCGAAGAAGACAAAAACAAGTCTCTTAGGGATGACAATGAATTGCTTGATGCTGCAATTGGTTATAAGTCTGGCGACGACTCCAAATCCGACTCTGATTCTAAATCTGATGAAGATTCAAAGTCCGATTCAGACTCTAAGTCCTCTGATGATTCTAAGTCTGACTCAGCCTCCAACTCAGATTCCAAACCCAGCACAAAATTCAAACCTGCTTCTGGTTCAACATCAAGCAAAAAAAAGAAGACTGAAAAAAGCAAGGAAAGGAAAAAGAATCTTAGGAAAAAGAAGAGGGGGCTTAAGATGGCTATGCTCTCTGTTCTTTCCTTGAATTATGAAGTAAACTTTACTTTCCCATCTAAAAAGTGATATCATTGATGTGTGGTATCCAATGCTTTTGGGCCACTTGGCGCCCATAATTTAAAGGCCATTTTAAATTATTGGGGCCGTCCAATTGAAGTACAAGAACGTTTTAAAGAAGAAGCCCTGCTAATCCTCTGCAAGTATAAATACTCAAAGTAGACTCAATTCACACACAGCACAGGCCTGTATCAATAATATTATATCAGTGTCAATTAAGTCTCTTTTAATGGCTTCGGGAATCGCCAGCTGGGAAGAGGTGCAGAGGGCAGAGGCTTCTTCTAATTCGGAAAAGAAAGTCCCTGAGGTGAGAAAAGAAGCCGAAAAGGAAAAAGAGAAGCTCGAAAGCCCCCATAACTCCGACTCAGACTCAAAGTCAAACAATGGCTCCGGAAATGACTCCGACAGTAGCTCTAAATCAGGCTCTCGTAGTAATTCCAAGACCAAAGCTTCGAGCAAGAAACAAAAGCAAAAGAAGAAAAGGGCAGTGAAGAAAGCAACAGAGGCAGGAGAAGCTGAGGACGACCTTGAATGCCATCACAGCAGCGATTCAAATGCCCATTCTGGCAATGATTCGGATAATAGCACAAAATCAAATTCCAGCTCCAAATCTGGCCCTAAATTGGAAAATGAGAATAAGAAGAAGGCTGATCTGGAGAATGATGAGAGCTCCGGCAAACAGAAGGAAGCTACTGTGGAGAAAAAGCTGACCGTAGATGTCGATAAAACTGAAGCAAGAGGTGAGAGCAATAGTAGTGAAAATACTGCTTCAGCAAGTGAGAAGGGGATGCTTGAAAGGATAATGGAGAAGCTTCCTGCTAAATAAGGGAATTTGAAACTAATGAAAAACTAAATGAAGTATGAAACGGCTTGTTGCTCGCACAACATGAGTTTATTTATTTAAATAAATGTGATTATCATATACGATTTTTCATGTTTGGTGATTTATGTCAATAAATGTCTGTGCTAATATATCAATGTAAATAAATCATTGGGATAAATGAAATTATGAGATTTGTATTTTTATTGATTGAAGACTATTATTTTCAGTGAAACTTGTCCCCATTGATTTGAAGAAAATCCTTATATATTTGT

Network for GWHGAAEX017428

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.420
SRP064423	SRR2545915	Juvenile tuber	238.890
SRP108465	SRR5643513	five period of Gastrodia elata	47.490
	SRR5643514	five period of Gastrodia elata	79.750
	SRR5643515	five period of Gastrodia elata	88.490
	SRR5643524	five period of Gastrodia elata	136.440
	SRR5643525	five period of Gastrodia elata	2.480
	SRR5643528	five period of Gastrodia elata	1.680
	SRR5643658	five period of Gastrodia elata	7.650
	SRR5643659	five period of Gastrodia elata	2.010
	SRR5643660	five period of Gastrodia elata	0.370
	SRR5643661	five period of Gastrodia elata	0.570
	SRR5643662	five period of Gastrodia elata	0.440
	SRR5643663	five period of Gastrodia elata	0.370
	SRR5643664	five period of Gastrodia elata	0.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	44.690
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	72.070
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	87.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	62.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	35.800
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.960
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	46.090
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	89.310
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.820
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	68.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	68.410
SRP279888	Gastro	Gastrodia elata tuber	1.34
	Juven	Juvenile tuber	2.97
	Mother_Gastro	Mother tuber of Gastrodia elata	1.39
	Mother_Juven	Mother tuber of Juvenile	2.02