Gene detail

Detail information of GWHGAAEX017432/evm.TU.scaffold_81.26

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4698	3.00E-69	Uncharacterized conserved protein
nr	gi\|672124987\|ref\|XP_008785898.1\|	2.16E-137	PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like [Phoenix dactylifera]
trEMBL	tr\|V4WGC8\|V4WGC8_9ROSI	4.00E-111	Uncharacterized protein {ECO:0000313\|EMBL:ESR65674.1}
TAIR	AT2G41640	3.00E-69	Glycosyltransferase family 61 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000087	911849	914280	+

Transcript Sequence
>GWHTAAEX017432 ATGAAAAAAATTCTGTGTGGGAATATAAGAGAAATAAAAATGAGGCTTTCTCTTCTTAAGTCAAAATGCAATAAAAAACGTTATAAGAATAATTATGCGTTCGCAGAGAAGGATTTGTTATGGTTAAGAAGTCATTGTCCCGCACCAAATAGAGGATTGAGAAATGCTCGAGCACTCTGTATAAATTTATTATTAAAGAGAAGCAGGGATATGCCGAATATGGCCAAGTGTTCAGGAAGGCCACTGCTGGGTGTGCTGTTCTTGCCGCTCCTCTATGGTCTCTTTCCTTCTGATCTGTGGAAGTCGCAATGGAGCAGCCTCAGCTTCGAACCAAGTCATCCGGAATTCCATCAGGCCGCTGAATTTTTGAAGCCCCAACTTTTGAGATTACTGCGAGGTGACGGCCAACAGGAGCTGGAGCAAAACGGGTTGGGCTGCAGCATCTCAAACGATCACTCCGACATCTGCGTGAGTGAGCTCCCGGTCAGAATCACGGCGGGCTCGGGCGGCATAATCGTCCATATCGCCAACGGGCAAACCCTAGCTCGTCCCTTGAATCTGACCCTGTATCCGTACCCGTGCAAATCTGACCCCATTGCCATATCCCGCACGACCGCCGTCACTCTCCTCCGCTCCGCGGCGGCTCCGCCTCCGTGCTCCGGCCACTACACCTCCCCGGCGCTCCTCTTCTCCGCAGGCGGCTACGCCGGAAACTTCTTTCACGACGTCAACGATGTCCTCATTCCCCTTTTCCTGACCTCCGCCCCTCTCCGCCCCCATCTACGGCTCCTCATCACAGATCTCCGGTCTTACTGGTCCCAAAAGTACCGCCGCATCCTCCGCCTCTTCTCCGCCTTCGAACCCCTCCCGCTCCCCTCGGCTTCCAACCGCGTCCTCTGCTTCCCCTCCGCCATTATCGGTCTCAGATACCACGGCAATCTTCTCTGCAACTCCACCGAGCCCCCGGGCGGGATCTCCACCGTAGATTTCCGCCGTTTCCTACACGAATCCCTCTCCCTCCCCAGCTCGACAGATCGCCTGATTCTGGTCCTCATCTCACGGCGCAAGTCCCGGGTGATCGTCAACGAGGAGGATGCGGTGAGGGCGGCGAAGGAGGCGGGATTTTCTGTGGTCGTGGCGCGGCCGGAGATGGCGAGCAGAGTGGACGGCTTCGCAGGGCTCGTCCATGGCTGCAGCGTTTTGATGGGGGTTCACGGGGCGGGCCTCGCTAATCTGGTGTTCCTGCGGCCTCGCGCAGTGCTGCTGCAGATTGTGCCTTGGGGGTTGGAATGGGCGGCGGCGGAGTATTACGAGAGGCCGGCCAGGCGGCTAGGGTTAGGGTACGCGGAGTATCGCATCAAGGTGGAGGAGAGCTCTTTGTACGAGCAATACCCGAGGGATCATCCTGTGATTGCGGATCCCTGGTTGGTTAATCGAAGGGGGTATAATGTGAGCCGGCCGGTTTATACGGACGGCCAGGATTTGAGGATTGATGCGGTCAGGCTTAGGGACACGCTTCTTCAGACCCGAAGGATGCTGACGATGCCACCGCCACCATTGCCTTCTTCCAATGCCGCTGCTGCTTGTTGA

Network for GWHGAAEX017432

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04577.13	DUF563	238	446	9.50E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K18207	POMGNT2, GTDC2	Metabolic pathways	map01100
K18207	POMGNT2, GTDC2	Mannose type O-glycan biosynthesis	map00515

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.590
SRP064423	SRR2545915	Juvenile tuber	2.840
SRP108465	SRR5643513	five period of Gastrodia elata	6.550
	SRR5643514	five period of Gastrodia elata	4.050
	SRR5643515	five period of Gastrodia elata	6.160
	SRR5643524	five period of Gastrodia elata	3.860
	SRR5643525	five period of Gastrodia elata	31.250
	SRR5643528	five period of Gastrodia elata	16.430
	SRR5643658	five period of Gastrodia elata	84.840
	SRR5643659	five period of Gastrodia elata	2.890
	SRR5643660	five period of Gastrodia elata	1.410
	SRR5643661	five period of Gastrodia elata	3.110
	SRR5643662	five period of Gastrodia elata	5.600
	SRR5643663	five period of Gastrodia elata	3.910
	SRR5643664	five period of Gastrodia elata	2.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.100
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.250
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.800
SRP279888	Gastro	Gastrodia elata tuber	8.70
	Juven	Juvenile tuber	4.82
	Mother_Gastro	Mother tuber of Gastrodia elata	4.04
	Mother_Juven	Mother tuber of Juvenile	3.32