Gene detail

Detail information of GWHGAAEX017445/evm.TU.scaffold_81.40_evm.TU.scaffold_81.41

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743855257\|ref\|XP_010941314.1\|	0	PREDICTED: uncharacterized protein LOC105059637 [Elaeis guineensis]
trEMBL	tr\|A0A0A0KMI6\|A0A0A0KMI6_CUCSA	0	Uncharacterized protein {ECO:0000313\|EMBL:KGN48936.1}
TAIR	AT3G51290	2.00E-129	Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000087	1178551	1189568	-

Transcript Sequence
>GWHTAAEX017445 GGAAGAAGAAGAAGGAGGAGGAGGGATGGGCTGCTGCCATTCCCATCTTCAGAGCAAGGAAGCCGTTTCCCGTTGCAAAGCCCGGCGCCGCTATATGAGTGAGCTCTCTGAGGCCCGACAAGCTTTCTCCATAGCTCACTCTCTTTACCTCCATTTCATCCGTTCAGCAGGCTCTGCTCTTCTTCAGTTCGCCAATGCCGAATCCCATCTCCACCGTCCATCTCCCTTGTCTACGATTCATTCACCGCCATGTCATCGCCCTCCTTCTCCTCTGAGTCCTATATCTGACAACTGGGCTTCATCAGTCACTGCCTCCCCTGTTCTTCCCCCTCCTCCTCCACCTCCTCCTCCTCTTGCTTCCTGCTCATGGGAATTCTGGGACCCGTTTGCCCCCTCTTCCGCTCACTCAGTCACTGAAGAAGAGTGGGAAGAGGCAGTCACCTCCATCTCATCCGCAAACGCTGCTACTCCGGAACTCGTCAGTGGATTTCCGAAGGATCCCTCAGTCGAGCTCGCTGTGGTTTCTGTTCCCAGAGCAAAGAAGAATTTCTCCGAGATAGTCGAGGAGCTAAACGAGTACTTCAGCAAGGCCTCCGAGACAGGGAAAAGGGTTTCCCTTGTTTTGGAAACCCCTATTTGCGATTCTGCTTCTCCAAAACGCGGGATTTCCGGGAAAATGTCTGTGTATTGCAAAAACTTTAGCCCGTTGATCCGTCCGTGGAGCTCGAGCCCAAAATCCTCGGCTTTAGCTAGTCTTAGGGAGTCTGGGAAGGGTATGAGTAGAGCGAGCCATTCTTGTACCGTTGAGAAGCTGTATGCTTGGGAAAAAAAGCTCTATCTTGAAGTTAAGAATTGTGAGCGAAGTAGGGTGGATAAAGAGAAGAGGATGAGCTTGCTGAGAAGGCAAGAGGCAAATGGTGTGGATTACTTCAAGGTTGAGAAGAACAAGAGGGAGATTGAGAGGCTTGAGTCTCAGCTGATGGTTTATTGCCAAGCTATTGAGTCCACATCCGCTGAGATTGCTAAGCTCACAGAAGAGGAACTCTTTCCCCAGCTCCTCGATCTTGCCAGCGGCTTGATGAGCATGTGGAGAGGAATGTATGAATGCCATCAGGTTCAAACTCACATTGTGCAGCAACTCCAGCATCTAAACAGCAGCAATCCATCGAGCACCTTTCCCACCTCCGAACTCCACCGCCATAACACCCAACAGCTAGAGGCAGAAATCGACAATTGGCACTCCGCCTTCTGCAGTCTCATCAAGTCCCAGAGAGACTACATTCACGCAATCACCGGTTGGCTCCGCCTCTCCCATTTCCAATGCCAGCACGGCCATCGAAATCGCCAAAACTCCCAAATATATGAACTCTGCGAGGAATGGCAGCTCGCCCTCGATAGAGTTCCCGACAAGGTTGCCTCCGATGGGATTAAAAGCTTCTTAACCATGATCCGCACCGTCGTCGCACAGCAAGCCGAGGAGCACAAGTACAAGAAGAGATCGGATTCCGCGTTTAAGGAGCTCGAGAAGAGATCGAAGGAACTCAGATCGCGGGAAGAGAAGAGAGCAAGGGTTGAGGTTTTGAAATTGAAGGCAGAGGAAGAGAGGGTGAAGTATGAGAAAAGCTGCGGAATCACAAGGGCGAAGACTTTGAACAATCTTCAGACGGGGCTCCCCAATCTTTTCCAGGCTATGACTGGATTCTCGAGCGTCTGCACGCAAGCGTTTAGCGAGGTTTGTAACCCTCAGAGGAAATCAAACATTGCTGTGAACTTCGACAGGATGCTCCTTCCTTGAGAGAGATTGAGAGGAAACTGAAGGAAAATGTGCATCTCAGGAGTACATAGTCATATTTTTGTGCGGGAAGGTAAACTTAGATCCACGGAGTTCCGAGACTGGGGGAAAATACTGTAAAAATGATTGTTTTTGATATGCAGTCTGAAGCTTTAAGAATGGCAATCTCTTCTGGTGGTGTTGTGCAAATCTGTTCGTTATGTGCAGGATTTTACGCTATTGCAGAAATTTCGTCTTTCTGCATTATGTTTTTTAAATTATAACTCAGCTTAGCATTAGATTATATCTGGTGGATTTGGAT

Network for GWHGAAEX017445

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04783.11	DUF630	1	59	4.00E-15
PF04782.11	DUF632	176	476	5.30E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.770
SRP064423	SRR2545915	Juvenile tuber	0.980
SRP108465	SRR5643513	five period of Gastrodia elata	1.380
	SRR5643514	five period of Gastrodia elata	1.790
	SRR5643515	five period of Gastrodia elata	1.500
	SRR5643524	five period of Gastrodia elata	1.520
	SRR5643525	five period of Gastrodia elata	0.220
	SRR5643528	five period of Gastrodia elata	0.260
	SRR5643658	five period of Gastrodia elata	0.090
	SRR5643659	five period of Gastrodia elata	0.890
	SRR5643660	five period of Gastrodia elata	1.000
	SRR5643661	five period of Gastrodia elata	1.430
	SRR5643662	five period of Gastrodia elata	0.500
	SRR5643663	five period of Gastrodia elata	0.560
	SRR5643664	five period of Gastrodia elata	0.770
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.870
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.260
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.620
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.060
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.890
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.080
SRP279888	Gastro	Gastrodia elata tuber	0.54
	Juven	Juvenile tuber	0.72
	Mother_Gastro	Mother tuber of Gastrodia elata	0.36
	Mother_Juven	Mother tuber of Juvenile	0.43