Detail information of GWHGAAEX017446/evm.TU.scaffold_81.42
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|568305789|ref|YP_008978071.1| | 2.00E-19 | catalase/peroxidase HPI [Phaeobacter gallaeciensis DSM 26640] |
| nr | gi|672176669|ref|XP_008808406.1| | 2.84E-170 | PREDICTED: probable L-ascorbate peroxidase 4 [Phoenix dactylifera] |
| Swissprot | tr|Q6ZJJ1|APX4_ORYSJ | 5.00E-159 | Probable L-ascorbate peroxidase 4 |
| trEMBL | tr|B3TLT1|B3TLT1_ELAGV | 3.00E-162 | Peroxisome type ascorbate peroxidase {ECO:0000313|EMBL:ACF06512.1} |
| TAIR | AT4G35000 | 3.00E-151 | ascorbate peroxidase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000087 | 1191405 | 1222478 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017446
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 77 | 283 | 3.70E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00434 | E1.11.1.11 | Metabolic pathways | map01100 |
| Ascorbate and aldarate metabolism | map00053 | ||
| Glutathione metabolism | map00480 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 92.360 |
| SRR2545915 | Juvenile tuber | 110.440 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 125.860 |
| SRR5643514 | five period of Gastrodia elata | 114.540 | |
| SRR5643515 | five period of Gastrodia elata | 138.760 | |
| SRR5643524 | five period of Gastrodia elata | 115.530 | |
| SRR5643525 | five period of Gastrodia elata | 116.220 | |
| SRR5643528 | five period of Gastrodia elata | 152.120 | |
| SRR5643658 | five period of Gastrodia elata | 132.550 | |
| SRR5643659 | five period of Gastrodia elata | 119.460 | |
| SRR5643660 | five period of Gastrodia elata | 118.210 | |
| SRR5643661 | five period of Gastrodia elata | 132.630 | |
| SRR5643662 | five period of Gastrodia elata | 123.320 | |
| SRR5643663 | five period of Gastrodia elata | 103.580 | |
| SRR5643664 | five period of Gastrodia elata | 86.740 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 116.880 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 133.580 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 114.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 129.190 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 128.690 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 137.800 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 123.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 135.790 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 110.740 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 111.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 125.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 125.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 122.55 |
| Juven | Juvenile tuber | 131.83 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 120.06 | |
| Mother_Juven | Mother tuber of Juvenile | 100.50 |