Detail information of GWHGAAEX017457/evm.TU.scaffold_81.58
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|374989280|ref|YP_004964775.1| | 4.00E-24 | serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1] |
| KOG | KOG0661 | 2.00E-169 | MAPK related serine/threonine protein kinase |
| nr | gi|743872969|ref|XP_010906697.1| | 0 | PREDICTED: cyclin-dependent kinase F-4-like [Elaeis guineensis] |
| Swissprot | tr|Q6Z8C8|CDKF4_ORYSJ | 0 | Cyclin-dependent kinase F-4 |
| trEMBL | tr|D7U3Y1|D7U3Y1_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI37450.3} |
| TAIR | AT5G45430 | 2.00E-169 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000087 | 1605710 | 1619464 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017457
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 6 | 283 | 3.90E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_RCK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 66.740 |
| SRR2545915 | Juvenile tuber | 58.960 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 42.480 |
| SRR5643514 | five period of Gastrodia elata | 47.230 | |
| SRR5643515 | five period of Gastrodia elata | 50.630 | |
| SRR5643524 | five period of Gastrodia elata | 46.940 | |
| SRR5643525 | five period of Gastrodia elata | 62.010 | |
| SRR5643528 | five period of Gastrodia elata | 74.790 | |
| SRR5643658 | five period of Gastrodia elata | 71.900 | |
| SRR5643659 | five period of Gastrodia elata | 76.790 | |
| SRR5643660 | five period of Gastrodia elata | 84.870 | |
| SRR5643661 | five period of Gastrodia elata | 72.980 | |
| SRR5643662 | five period of Gastrodia elata | 76.060 | |
| SRR5643663 | five period of Gastrodia elata | 76.060 | |
| SRR5643664 | five period of Gastrodia elata | 75.420 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 56.510 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 75.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 53.880 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 58.330 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 65.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 65.540 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 58.840 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 63.790 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 47.560 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 52.290 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.230 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.230 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 104.86 |
| Juven | Juvenile tuber | 95.59 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 85.60 | |
| Mother_Juven | Mother tuber of Juvenile | 113.28 |