Detail information of GWHGAAEX017459/evm.TU.scaffold_81.61
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|29376354|ref|NP_815508.1| | 9.00E-07 | general stress protein A [Enterococcus faecalis V583] |
| nr | gi|675275149|gb|AIL52750.1| | 0 | polygalacturonate 4-alpha-galacturonosyltransferase-like protein [Dendrobium catenatum] |
| Swissprot | tr|Q9LE59|GAUT1_ARATH | 0 | Polygalacturonate 4-alpha-galacturonosyltransferase |
| trEMBL | tr|A0A077EUA4|A0A077EUA4_9ASPA | 0 | Polygalacturonate 4-alpha-galacturonosyltransferase-like protein {ECO:0000313|EMBL:AIL52750.1} |
| TAIR | AT3G61130 | 0 | galacturonosyltransferase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000087 | 1670564 | 1707696 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017459
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01501.19 | Glyco_transf_8 | 347 | 661 | 6.10E-94 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT8 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13648 | GAUT | Metabolic pathways | map01100 |
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.810 |
| SRR2545915 | Juvenile tuber | 16.100 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.340 |
| SRR5643514 | five period of Gastrodia elata | 12.790 | |
| SRR5643515 | five period of Gastrodia elata | 12.310 | |
| SRR5643524 | five period of Gastrodia elata | 12.320 | |
| SRR5643525 | five period of Gastrodia elata | 17.290 | |
| SRR5643528 | five period of Gastrodia elata | 15.900 | |
| SRR5643658 | five period of Gastrodia elata | 18.350 | |
| SRR5643659 | five period of Gastrodia elata | 16.330 | |
| SRR5643660 | five period of Gastrodia elata | 13.660 | |
| SRR5643661 | five period of Gastrodia elata | 14.500 | |
| SRR5643662 | five period of Gastrodia elata | 13.220 | |
| SRR5643663 | five period of Gastrodia elata | 15.460 | |
| SRR5643664 | five period of Gastrodia elata | 13.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 17.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.100 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.770 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.880 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.510 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.180 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.690 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.980 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.320 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.180 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.180 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.56 |
| Juven | Juvenile tuber | 13.98 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.65 | |
| Mother_Juven | Mother tuber of Juvenile | 14.21 |