Gene detail

Detail information of GWHGAAEX017463/evm.TU.scaffold_81.66

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|427713632\|ref\|YP_007062256.1\|	1.00E-36	alpha/beta hydrolase [Synechococcus sp. PCC 6312]
KOG	KOG0133	8.00E-62	Deoxyribodipyrimidine photolyase/cryptochrome
nr	gi\|743877867\|ref\|XP_010908020.1\|	0	PREDICTED: uncharacterized protein LOC105034519 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q651U1\|CRYD_ORYSJ	4.00E-13	Cryptochrome DASH, chloroplastic/mitochondrial (Precursor)
trEMBL	tr\|M0TF10\|M0TF10_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P05700_001}
TAIR	AT4G25290_1	8.00E-62	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000087	1802541	1874838	-

Transcript Sequence
>GWHTAAEX017463 ATGGCAGTCTCTTCGGCTACCGTTCACTCTTTGCTTGACGGCCACATAATCTGTGGCCAGTCTCGCATTTCTTCGAAGCGCTACAACTTACTGGCAATGACAGGCGCCGGCGACCTTTCCGGTTCCAGCTCTGGCGCTGCAGTGGTGTGGTATAAACATGATCTGCGAGTGGACGACCACCCCGGCCTTGTAGCTGCAACTTCCCAGCAGCGGACTGTCGTTCCCCTTTATATCTTCGATCGCCGGATAATTTCCGGATTATCAGATGAGATGCTTGATCTTCTTCTTTTGGCTTTGGGGGATCTAAAGAAACTTTTGAAGGACAAGGGATCTGATCTTTTTGTTGGCTTTGGAAAATCAGAAGATATTATAATAAAAATTGTCAATGAGTTCAAAGCTACCCTAATTTTCACAGAAGAGGATGTAGATTGCAATATTAGTACTGTGATCAATACTGTTGAATCTCGCTTGTTGGCTACGTTGTTTCCATGGGGAAGTCCAAAGTTCACGTTTTGGAAAGCTCCTTTATATGATGTTAAGAATGTGAAGGAGCTGCCTGCATCATACAATGCCTTTCGAAAGTTGAAATTGCCTGTGTCCGATCCTGTTGCTGCCCCTTTCTTGCCCATGTTAAACATCGGATTGGAAATAGGGGATTTACCAACAATTGATTATGTAAAAAGCTATCTGAAAGATGAAAGCTGGACCTATATGAAGAAAATTTCAGCTCAAGCTATTTTAGAGACGTACCACAAAGGAGTTGTAAAGCATGGCCTAATTGAAAATTCTCACAATGTATTCGAAATCAATTCGAACACTACCGTGGTGCATCAAACAGAAAAAGTCAAATTTTTATCTTCACATCTTAATGGATCTCAAGTGAAAGGTGGAACAAGTTCTGTTTTGAATGCTTTTTCTGGTTTTCTTAGAGATCTGGATGGAGCAGGAAGGAAGGATTGGGAGAAAGAGTTTGAATCCTTGCTACTCAACGTGCTATTTAATAAAATGCGTATGGCTGCATGCAGGAATGGAGCCTCCTTTGGTGCACTTTTTGGAGCTTCCCTCTATTTTGGAACCATTTCCAGGAGAAGGATTCATTATGAAGCTATTAAATATGCAAATAATCATAGAGCAGGATTCTTGTCATCTTTTGGATTCTCATCACCTGCTGTTGCAGCAGCAGTTAAGGCTATTTGTTCCATGGAGTGGTATCAACTTTTGGCTATGAAAAGCCTTTGTCAAAATGAAGGCACATGCTGTATACGGATATGGAGATGGAGAGGATTTCTCATTCAGTACACAGTAGCTGGTCAGGAGGGTCCTCCGGTACTTTTCGCACATGGTTTTGGAGCTTTTCTAGAGCATTTTCGTGAGAACATCTCTGCTGTGGCTAAGAGTGGACACCGAGTTTGGGGAATTACACTTTTAGGTTTTGGAAAGTCTGAGAAACCAAATGTTTTGTATAATGCATCTCTGTGGGCAGAATTAATAAGGGACTTTATTCTGGATATTGTGAGAGAACCAATTCATCTAGTTGGAAATTCAATTGGAGGCTATTTTGTAGCTGCTGCAGCGGCCTTTTGGCCTCCCTTGGCTAAGTCTTTGGTCCTTGTTAATACAGCTGGCTCAGTGGCTTCTAAGTATTCAGATACGCAACTAACAGAGCCAAGAGTATTATGTGGACTTACATGGATAGGCAGCCAACTTTTATTATTCTATATGAGGTTAAGAGTTGCAGATATTGTCAAGAAGTGCTATCCAACTAATCCTGAAAGGGTTGATGATTGGCTCATCCAAGAAATGCTAAGAGCTTCATTTGATCCTGGTGTCATGGCCGTTGTTGAGAGTATGCTCAGTTTCAGACTGCCGGTCCCTATCAATTATCTATTGCAATGGTTCGGTGGAAAAGCTTTGTTTATTCAGGGTGTGCGAGACCCACTCTGCAATTCAAAGAAACGGATATCATTGATTCGTGAGTACTGTAAATTTGCTGCTATTAAAGAGCTTGATGCAG

Network for GWHGAAEX017463

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00875.17	DNA_photolyase	47	182	3.00E-20
PF00561.19	Abhydrolase_1	441	543	4.50E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.490
SRP064423	SRR2545915	Juvenile tuber	6.840
SRP108465	SRR5643513	five period of Gastrodia elata	5.670
	SRR5643514	five period of Gastrodia elata	6.790
	SRR5643515	five period of Gastrodia elata	5.430
	SRR5643524	five period of Gastrodia elata	6.460
	SRR5643525	five period of Gastrodia elata	5.360
	SRR5643528	five period of Gastrodia elata	8.160
	SRR5643658	five period of Gastrodia elata	8.870
	SRR5643659	five period of Gastrodia elata	5.150
	SRR5643660	five period of Gastrodia elata	5.290
	SRR5643661	five period of Gastrodia elata	4.820
	SRR5643662	five period of Gastrodia elata	4.860
	SRR5643663	five period of Gastrodia elata	4.850
	SRR5643664	five period of Gastrodia elata	5.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.770
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.020
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.600
SRP279888	Gastro	Gastrodia elata tuber	6.71
	Juven	Juvenile tuber	8.47
	Mother_Gastro	Mother tuber of Gastrodia elata	17.07
	Mother_Juven	Mother tuber of Juvenile	13.97