Detail information of GWHGAAEX017469/evm.TU.scaffold_81.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83311600|ref|YP_421864.1|0Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Magnetospirillum magneticum AMB-1]
KOGKOG11760Acyl-CoA synthetase
nrgi|743833376|ref|XP_010935251.1|0PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Elaeis guineensis]
Swissprottr|F4HUK6|AAE1_ARATH0Probable acyl-activating enzyme 1, peroxisomal
trEMBLtr|M5VIW5|M5VIW5_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ00977.1}
TAIRAT1G205600acyl activating enzyme 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008721612442164450+
Transcript Sequence

Network for GWHGAAEX017469

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00501.27AMP-binding204431.80E-84
PF13193.5AMP-binding_C4525264.60E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.150
SRR2545915Juvenile tuber14.500
SRP108465SRR5643513five period of Gastrodia elata16.210
SRR5643514five period of Gastrodia elata15.520
SRR5643515five period of Gastrodia elata10.190
SRR5643524five period of Gastrodia elata13.090
SRR5643525five period of Gastrodia elata28.200
SRR5643528five period of Gastrodia elata13.500
SRR5643658five period of Gastrodia elata24.210
SRR5643659five period of Gastrodia elata8.710
SRR5643660five period of Gastrodia elata9.840
SRR5643661five period of Gastrodia elata9.290
SRR5643662five period of Gastrodia elata10.880
SRR5643663five period of Gastrodia elata13.170
SRR5643664five period of Gastrodia elata14.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.000
SRR6049655Rhizomagastrodiae_C368-T10_good_121.090
SRR6049656Rhizomagastrodiae_C368-T07_good_118.240
SRR6049657Rhizomagastrodiae_C368-T07_good_125.070
SRR6049658Rhizomagastrodiae_C368-T04_good_126.720
SRR6049659Rhizomagastrodiae_C368-T04_good_133.210
SRR6049660Rhizomagastrodiae_C368-T01_good_123.190
SRR6049661Rhizomagastrodiae_C368-T04_good_125.000
SRR6049662Rhizomagastrodiae_C368-T01_good_115.510
SRR6049663Rhizomagastrodiae_C368-T01_good_116.580
SRR6049664Rhizomagastrodiae_C368-T10_good_119.730
SRR6049665Rhizomagastrodiae_C368-T10_good_119.730
SRP279888GastroGastrodia elata tuber 10.10
JuvenJuvenile tuber8.99
Mother_GastroMother tuber of Gastrodia elata 15.77
Mother_JuvenMother tuber of Juvenile 7.54