Detail information of GWHGAAEX017472/evm.TU.scaffold_81.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24271.00E-88Uncharacterized conserved protein
nrgi|672141673|ref|XP_008794673.1|0PREDICTED: protein FAM63A isoform X2 [Phoenix dactylifera]
trEMBLtr|A0A061GC08|A0A061GC08_THECC0Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOY24584.1}
TAIRAT4G118601.00E-88Protein of unknown function (DUF544)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008722719112313157+
Transcript Sequence

Network for GWHGAAEX017472

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04424.12MINDY_DUB461697.20E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:1990380Molecular FunctionLys48-specific deubiquitinase activity
GO:0004843Molecular Functionthiol-dependent ubiquitin-specific protease activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.460
SRR2545915Juvenile tuber28.550
SRP108465SRR5643513five period of Gastrodia elata16.400
SRR5643514five period of Gastrodia elata14.570
SRR5643515five period of Gastrodia elata14.430
SRR5643524five period of Gastrodia elata16.150
SRR5643525five period of Gastrodia elata15.050
SRR5643528five period of Gastrodia elata15.640
SRR5643658five period of Gastrodia elata21.180
SRR5643659five period of Gastrodia elata14.220
SRR5643660five period of Gastrodia elata12.540
SRR5643661five period of Gastrodia elata13.100
SRR5643662five period of Gastrodia elata13.440
SRR5643663five period of Gastrodia elata14.370
SRR5643664five period of Gastrodia elata13.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.110
SRR6049655Rhizomagastrodiae_C368-T10_good_114.900
SRR6049656Rhizomagastrodiae_C368-T07_good_114.800
SRR6049657Rhizomagastrodiae_C368-T07_good_115.040
SRR6049658Rhizomagastrodiae_C368-T04_good_114.750
SRR6049659Rhizomagastrodiae_C368-T04_good_119.440
SRR6049660Rhizomagastrodiae_C368-T01_good_115.060
SRR6049661Rhizomagastrodiae_C368-T04_good_115.580
SRR6049662Rhizomagastrodiae_C368-T01_good_115.000
SRR6049663Rhizomagastrodiae_C368-T01_good_115.430
SRR6049664Rhizomagastrodiae_C368-T10_good_115.560
SRR6049665Rhizomagastrodiae_C368-T10_good_115.560
SRP279888GastroGastrodia elata tuber 20.95
JuvenJuvenile tuber24.39
Mother_GastroMother tuber of Gastrodia elata 22.95
Mother_JuvenMother tuber of Juvenile 28.22