Detail information of GWHGAAEX017474/evm.TU.scaffold_81.81
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226229238|ref|YP_002763344.1| | 6.00E-25 | putative protein kinase [Gemmatimonas aurantiaca T-27] |
| KOG | KOG1187 | 3.00E-135 | Serine/threonine protein kinase |
| nr | gi|672130249|ref|XP_008788652.1| | 5.57E-175 | PREDICTED: probable receptor-like protein kinase At5g47070 [Phoenix dactylifera] |
| Swissprot | tr|Q9LTC0|Y5707_ARATH | 8.00E-136 | Probable receptor-like protein kinase At5g47070 |
| trEMBL | tr|M0SQY1|M0SQY1_MUSAM | 2.00E-169 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P21680_001} |
| TAIR | AT5G47070 | 3.00E-135 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000087 | 2459704 | 2466868 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017474
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 73 | 351 | 7.80E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 25.270 |
| SRR2545915 | Juvenile tuber | 31.850 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.530 |
| SRR5643514 | five period of Gastrodia elata | 15.460 | |
| SRR5643515 | five period of Gastrodia elata | 21.490 | |
| SRR5643524 | five period of Gastrodia elata | 16.000 | |
| SRR5643525 | five period of Gastrodia elata | 90.500 | |
| SRR5643528 | five period of Gastrodia elata | 78.760 | |
| SRR5643658 | five period of Gastrodia elata | 66.360 | |
| SRR5643659 | five period of Gastrodia elata | 37.170 | |
| SRR5643660 | five period of Gastrodia elata | 37.570 | |
| SRR5643661 | five period of Gastrodia elata | 42.880 | |
| SRR5643662 | five period of Gastrodia elata | 57.400 | |
| SRR5643663 | five period of Gastrodia elata | 46.400 | |
| SRR5643664 | five period of Gastrodia elata | 105.220 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 17.990 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.570 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.820 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.920 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.190 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.580 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 14.620 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.03 |
| Juven | Juvenile tuber | 13.35 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.02 | |
| Mother_Juven | Mother tuber of Juvenile | 16.08 |