Detail information of GWHGAAEX017482/evm.TU.scaffold_81.89


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|674897483|emb|CDY35401.1|1.45E-11BnaA03g19590D [Brassica napus]
Swissprottr|O81645|VILI3_ARATH4.00E-06Villin-3 {ECO:0000303|PubMed:10631247}
trEMBLtr|A0A078HCB4|A0A078HCB4_BRANA5.00E-12BnaA03g19590D protein {ECO:0000313|EMBL:CDY35401.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008726609262701573+
Transcript Sequence

Network for GWHGAAEX017482

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.930
SRR2545915Juvenile tuber2.600
SRP108465SRR5643513five period of Gastrodia elata0.750
SRR5643514five period of Gastrodia elata1.130
SRR5643515five period of Gastrodia elata0.500
SRR5643524five period of Gastrodia elata0.710
SRR5643525five period of Gastrodia elata0.430
SRR5643528five period of Gastrodia elata0.220
SRR5643658five period of Gastrodia elata0.570
SRR5643659five period of Gastrodia elata1.050
SRR5643660five period of Gastrodia elata0.860
SRR5643661five period of Gastrodia elata0.870
SRR5643662five period of Gastrodia elata0.860
SRR5643663five period of Gastrodia elata1.170
SRR5643664five period of Gastrodia elata0.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.880
SRR6049655Rhizomagastrodiae_C368-T10_good_13.900
SRR6049656Rhizomagastrodiae_C368-T07_good_12.500
SRR6049657Rhizomagastrodiae_C368-T07_good_12.350
SRR6049658Rhizomagastrodiae_C368-T04_good_14.770
SRR6049659Rhizomagastrodiae_C368-T04_good_16.500
SRR6049660Rhizomagastrodiae_C368-T01_good_14.490
SRR6049661Rhizomagastrodiae_C368-T04_good_13.910
SRR6049662Rhizomagastrodiae_C368-T01_good_13.090
SRR6049663Rhizomagastrodiae_C368-T01_good_14.080
SRR6049664Rhizomagastrodiae_C368-T10_good_12.290
SRR6049665Rhizomagastrodiae_C368-T10_good_12.290
SRP279888GastroGastrodia elata tuber 1.25
JuvenJuvenile tuber1.93
Mother_GastroMother tuber of Gastrodia elata 0.52
Mother_JuvenMother tuber of Juvenile 1.50