Detail information of GWHGAAEX017488/evm.TU.scaffold_81.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16541.00E-58Microtubule-associated anchor protein involved in autophagy and membrane trafficking
nrgi|743768884|ref|XP_010914718.1|7.54E-62PREDICTED: autophagy-related protein 8i [Elaeis guineensis]
Swissprottr|Q9LRP7|ATG8I_ARATH4.00E-59Autophagy-related protein 8i
trEMBLtr|M5XEY8|M5XEY8_PRUPE3.00E-60Autophagy-related protein {ECO:0000256|RuleBase:RU004384}
TAIRAT3G155801.00E-58Ubiquitin-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008728202262835408-
Transcript Sequence

Network for GWHGAAEX017488

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02991.15Atg8151183.20E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08341GABARAP, ATG8, LC3 Apelin signaling pathway map04371
FoxO signaling pathwaymap04068
Autophagy - animalmap04140
Autophagy - yeastmap04138
Autophagy - othermap04136
Mitophagy - animalmap04137
Mitophagy - yeastmap04139
NOD-like receptor signaling pathwaymap04621
GABAergic synapsemap04727
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.300
SRR2545915Juvenile tuber53.470
SRP108465SRR5643513five period of Gastrodia elata58.760
SRR5643514five period of Gastrodia elata75.300
SRR5643515five period of Gastrodia elata53.820
SRR5643524five period of Gastrodia elata60.770
SRR5643525five period of Gastrodia elata200.870
SRR5643528five period of Gastrodia elata179.060
SRR5643658five period of Gastrodia elata203.930
SRR5643659five period of Gastrodia elata25.380
SRR5643660five period of Gastrodia elata26.830
SRR5643661five period of Gastrodia elata28.550
SRR5643662five period of Gastrodia elata24.670
SRR5643663five period of Gastrodia elata21.060
SRR5643664five period of Gastrodia elata30.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_170.870
SRR6049655Rhizomagastrodiae_C368-T10_good_192.080
SRR6049656Rhizomagastrodiae_C368-T07_good_1106.040
SRR6049657Rhizomagastrodiae_C368-T07_good_174.140
SRR6049658Rhizomagastrodiae_C368-T04_good_184.420
SRR6049659Rhizomagastrodiae_C368-T04_good_196.370
SRR6049660Rhizomagastrodiae_C368-T01_good_181.930
SRR6049661Rhizomagastrodiae_C368-T04_good_1113.180
SRR6049662Rhizomagastrodiae_C368-T01_good_174.840
SRR6049663Rhizomagastrodiae_C368-T01_good_178.930
SRR6049664Rhizomagastrodiae_C368-T10_good_1120.370
SRR6049665Rhizomagastrodiae_C368-T10_good_1120.370
SRP279888GastroGastrodia elata tuber 79.73
JuvenJuvenile tuber56.39
Mother_GastroMother tuber of Gastrodia elata 223.62
Mother_JuvenMother tuber of Juvenile 85.65