Detail information of GWHGAAEX017490/evm.TU.scaffold_81.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31641.00E-74Uncharacterized proteins of PilT N-term./Vapc superfamily
nrgi|695041110|ref|XP_009408153.1|8.10E-116PREDICTED: rRNA-processing protein UTP23 homolog [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TEL7|M0TEL7_MUSAM3.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P04270_001}
TAIRAT2G345701.00E-74PIN domain-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008728370782856197-
Transcript Sequence

Network for GWHGAAEX017490

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04900.11Fcf1531493.30E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0032040Cellular Componentsmall-subunit processome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.350
SRR2545915Juvenile tuber26.690
SRP108465SRR5643513five period of Gastrodia elata30.790
SRR5643514five period of Gastrodia elata32.520
SRR5643515five period of Gastrodia elata29.670
SRR5643524five period of Gastrodia elata31.690
SRR5643525five period of Gastrodia elata18.260
SRR5643528five period of Gastrodia elata24.260
SRR5643658five period of Gastrodia elata19.950
SRR5643659five period of Gastrodia elata33.090
SRR5643660five period of Gastrodia elata33.560
SRR5643661five period of Gastrodia elata33.100
SRR5643662five period of Gastrodia elata18.910
SRR5643663five period of Gastrodia elata22.090
SRR5643664five period of Gastrodia elata21.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.430
SRR6049655Rhizomagastrodiae_C368-T10_good_144.690
SRR6049656Rhizomagastrodiae_C368-T07_good_131.220
SRR6049657Rhizomagastrodiae_C368-T07_good_122.010
SRR6049658Rhizomagastrodiae_C368-T04_good_124.100
SRR6049659Rhizomagastrodiae_C368-T04_good_119.530
SRR6049660Rhizomagastrodiae_C368-T01_good_129.060
SRR6049661Rhizomagastrodiae_C368-T04_good_122.700
SRR6049662Rhizomagastrodiae_C368-T01_good_135.230
SRR6049663Rhizomagastrodiae_C368-T01_good_133.280
SRR6049664Rhizomagastrodiae_C368-T10_good_137.440
SRR6049665Rhizomagastrodiae_C368-T10_good_137.440
SRP279888GastroGastrodia elata tuber 27.57
JuvenJuvenile tuber44.36
Mother_GastroMother tuber of Gastrodia elata 22.57
Mother_JuvenMother tuber of Juvenile 22.69