Gene detail

Detail information of GWHGAAEX017492/evm.TU.scaffold_81.99

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|325280864\|ref\|YP_004253406.1\|	5.00E-34	TIR protein [Odoribacter splanchnicus DSM 220712]
KOG	KOG0231	6.00E-123	Junctional membrane complex protein Junctophilin and related MORN repeat proteins
nr	gi\|743827298\|ref\|XP_010933554.1\|	4.50E-154	PREDICTED: uncharacterized protein LOC105053912 [Elaeis guineensis]
Swissprot	tr\|Q9SLG9\|PI5K5_ARATH	2.00E-27	Phosphatidylinositol 4-phosphate 5-kinase 5
trEMBL	tr\|M1B075\|M1B075_SOLTU	2.00E-151	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400034161}
TAIR	AT2G35170	6.00E-123	Histone H3 K4-specific methyltransferase SET7/9 family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000087	2884353	2894441	+

Transcript Sequence
>GWHTAAEX017492 ATGCATCTGAAGAAATCAGAGACTCAGATCGGCGAGGATAGCGTGGGGTTCTCCGCCGATTTGAGCTATCCTCTCCTCGAGATCCACATCTCAAACCCTAGCTCTGACTATGGCCTAACGCCTCAATCCTCGCATGTTACCTCCGTCCATGGCCTCCCTCAAGTCACCACACCGCACAAACGTCCTGTCATGAACCATTCAGCCGCCGCCGCCGCTGCCGCTGCAGCCGTTTCTGAAACTCACTGCCGCCCCATCTCTGCCATCCGCCCGCCGACTTCATATCTTCTCCGTCTTTTACTTTGGCTCCCCTTATCTTCCGCAACCCGGTCCAACATCCACCACCTTTTTCGCCGTCTCCGATTCCGCCTTCGTCTAGTTTTCCTGCTTTCCTTCCCCTTCATTTACTTCCTTTTTGTGACTTTCTTCTCCTCCTCATTACCTTCTCCTCCCTCAGCTTTAGAGCGCTTCTTTCTTCTAGATTTCTTCTCGGGTGTGGCTTTCTACTCCTCTATACTCTTCCTTCTTTGTTTCTCTCTAAACTTATTCCCTCTCTCCTCCCTTCGTCTTTTGCTTTCCCGGTCATCCTCTCTCCTCCCTCGTTGCTATCGAATCTCCCCTCGCCCCGTGCAATGGACCATTGGCTCCTCAATAGAATACCCCGAATCTGGCAACGGCGGCCTGTCTGGATTCTCCACCCAGGTCTACAGCAATGGCGATGTCTTTGAGGGGGAGTTTCACAAGGGGAAATGCTCTGGTAGCGGGGTTTATTATTACAACATGAGTGGGAGGTACGAGGGGGATTGGGTGGATAACAAGTACGATGGCTATGGAATTGAAACCTGGGCAAAGGGGAGCCGTTACAAGGGGCAATATAGGCAGGGTTTGCGGCACGGGCTTGGCGTGTATCGGTTTTTTACCGGAGATGTGTATGCAGGGGAATGGTCAAATGGGCAGAGCCATGGATCCGGATTGCATACATGTGAAGATGGCAGCAGATATGTTGGCGAGTTTAAATGGGGGGTCAAACATGGCTTTGGACATTATCATTTCAGGAATGGAGACACGTACGCGGGAGAATATTTTGGGGACAAGATGCACGGATATGGGGTGTATCTATTTGCGAACGGGCAGCAGTACGAGGGGGCGTGGCACGAGGGGCGGAGGCAGGGCCTTGGCATGTACACCTTCAGGAACGGCGAGACTCAGTCCGGCCACTGGCATAACGGCGCCCTCAGCACCCCAAACCCCACCCACTTCCCCTTCGACCTTTCCAAAGTTCTTAATGCCGTTCAGGAGGCTCGACGGGCAGCAACGAGAGCATTTGATCTCCCCAAGATTGATGATAGGGTCAGCAAGGCTGTCTCAGCTGCCAACAAAGCTGCTAGCGCGGCCAGAGTCGCCGCTGTAAAAGCCGTTCAGACTCGGATCTCCGCCGCCTGCTGA

Network for GWHGAAEX017492

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02493.19	MORN	241	260	0.0011
PF02493.19	MORN	264	286	2.30E-06
PF02493.19	MORN	287	309	8.00E-06
PF02493.19	MORN	310	332	1.40E-05
PF02493.19	MORN	333	355	5.80E-06
PF02493.19	MORN	356	377	5.80E-06
PF02493.19	MORN	379	400	1.60E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.920
SRP064423	SRR2545915	Juvenile tuber	6.530
SRP108465	SRR5643513	five period of Gastrodia elata	13.370
	SRR5643514	five period of Gastrodia elata	10.460
	SRR5643515	five period of Gastrodia elata	12.990
	SRR5643524	five period of Gastrodia elata	11.550
	SRR5643525	five period of Gastrodia elata	12.010
	SRR5643528	five period of Gastrodia elata	14.070
	SRR5643658	five period of Gastrodia elata	11.550
	SRR5643659	five period of Gastrodia elata	12.990
	SRR5643660	five period of Gastrodia elata	12.820
	SRR5643661	five period of Gastrodia elata	16.330
	SRR5643662	five period of Gastrodia elata	16.550
	SRR5643663	five period of Gastrodia elata	12.670
	SRR5643664	five period of Gastrodia elata	13.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.300
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.430
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.540
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.680
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.320
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.320
SRP279888	Gastro	Gastrodia elata tuber	8.25
	Juven	Juvenile tuber	11.75
	Mother_Gastro	Mother tuber of Gastrodia elata	17.27
	Mother_Juven	Mother tuber of Juvenile	14.08