Detail information of GWHGAAEX017505/evm.TU.scaffold_81.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672133767|ref|XP_008790518.1|2.93E-38PREDICTED: dof zinc finger protein DOF4.6-like [Phoenix dactylifera]
Swissprottr|Q8LAP8|DOF46_ARATH6.00E-34Dof zinc finger protein DOF4.6
trEMBLtr|B9GXU9|B9GXU9_POPTR1.00E-37Uncharacterized protein {ECO:0000313|EMBL:EEE78657.1}
TAIRAT3G456101.00E-32Dof-type zinc finger DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008732643503265965+
Transcript Sequence

Network for GWHGAAEX017505

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof39953.10E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.260
SRR2545915Juvenile tuber24.090
SRP108465SRR5643513five period of Gastrodia elata11.810
SRR5643514five period of Gastrodia elata17.980
SRR5643515five period of Gastrodia elata10.140
SRR5643524five period of Gastrodia elata11.360
SRR5643525five period of Gastrodia elata61.740
SRR5643528five period of Gastrodia elata42.310
SRR5643658five period of Gastrodia elata54.160
SRR5643659five period of Gastrodia elata26.540
SRR5643660five period of Gastrodia elata28.240
SRR5643661five period of Gastrodia elata19.520
SRR5643662five period of Gastrodia elata13.120
SRR5643663five period of Gastrodia elata19.530
SRR5643664five period of Gastrodia elata15.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.460
SRR6049655Rhizomagastrodiae_C368-T10_good_122.750
SRR6049656Rhizomagastrodiae_C368-T07_good_117.260
SRR6049657Rhizomagastrodiae_C368-T07_good_119.050
SRR6049658Rhizomagastrodiae_C368-T04_good_117.810
SRR6049659Rhizomagastrodiae_C368-T04_good_118.080
SRR6049660Rhizomagastrodiae_C368-T01_good_112.790
SRR6049661Rhizomagastrodiae_C368-T04_good_112.100
SRR6049662Rhizomagastrodiae_C368-T01_good_110.580
SRR6049663Rhizomagastrodiae_C368-T01_good_112.570
SRR6049664Rhizomagastrodiae_C368-T10_good_119.730
SRR6049665Rhizomagastrodiae_C368-T10_good_119.730
SRP279888GastroGastrodia elata tuber 21.37
JuvenJuvenile tuber18.52
Mother_GastroMother tuber of Gastrodia elata 13.83
Mother_JuvenMother tuber of Juvenile 6.42