Detail information of GWHGAAEX017515/evm.TU.scaffold_82.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34672.00E-66Histone H4
nrgi|195617694|gb|ACG30677.1|8.72E-66histone H4 [Zea mays]
Swissprottr|P0CG89|H4_SOYBN7.00E-67Histone H4
trEMBLtr|Q5NSW2|Q5NSW2_FRAAN5.00E-65Histone H4 {ECO:0000256|RuleBase:RU000528} (Fragment)
TAIRAT5G599702.00E-66Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000788258783211-
Transcript Sequence

Network for GWHGAAEX017515

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15511.5CENP-T_C35961.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0005634Cellular Componentnucleus
GO:0000786Cellular Componentnucleosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.130
SRR2545915Juvenile tuber47.630
SRP108465SRR5643513five period of Gastrodia elata213.970
SRR5643514five period of Gastrodia elata307.190
SRR5643515five period of Gastrodia elata168.960
SRR5643524five period of Gastrodia elata220.770
SRR5643525five period of Gastrodia elata189.450
SRR5643528five period of Gastrodia elata110.790
SRR5643658five period of Gastrodia elata76.230
SRR5643659five period of Gastrodia elata95.490
SRR5643660five period of Gastrodia elata106.070
SRR5643661five period of Gastrodia elata108.950
SRR5643662five period of Gastrodia elata87.530
SRR5643663five period of Gastrodia elata87.640
SRR5643664five period of Gastrodia elata88.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1199.240
SRR6049655Rhizomagastrodiae_C368-T10_good_1283.980
SRR6049656Rhizomagastrodiae_C368-T07_good_1258.550
SRR6049657Rhizomagastrodiae_C368-T07_good_1192.770
SRR6049658Rhizomagastrodiae_C368-T04_good_1175.810
SRR6049659Rhizomagastrodiae_C368-T04_good_1139.950
SRR6049660Rhizomagastrodiae_C368-T01_good_1187.600
SRR6049661Rhizomagastrodiae_C368-T04_good_1215.330
SRR6049662Rhizomagastrodiae_C368-T01_good_1294.730
SRR6049663Rhizomagastrodiae_C368-T01_good_1214.230
SRR6049664Rhizomagastrodiae_C368-T10_good_1363.340
SRR6049665Rhizomagastrodiae_C368-T10_good_1363.340
SRP279888GastroGastrodia elata tuber 135.15
JuvenJuvenile tuber88.28
Mother_GastroMother tuber of Gastrodia elata 148.43
Mother_JuvenMother tuber of Juvenile 48.00