Detail information of GWHGAAEX017520/evm.TU.scaffold_82.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12671.00E-45Mitochondrial transcription termination factor, mTERF
nrgi|672168958|ref|XP_008804497.1|4.80E-96PREDICTED: uncharacterized protein LOC103717770 [Phoenix dactylifera]
trEMBLtr|M7ZRR8|M7ZRR8_TRIUA5.00E-68Uncharacterized protein {ECO:0000313|EMBL:EMS65898.1, ECO:0000313|EnsemblPlants:TRIUR3_05466-P1}
TAIRAT5G649501.00E-45Mitochondrial transcription termination factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000078218573220276-
Transcript Sequence

Network for GWHGAAEX017520

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02536.13mTERF833552.40E-37
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilymTERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003690Molecular Functiondouble-stranded DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.350
SRR2545915Juvenile tuber11.490
SRP108465SRR5643513five period of Gastrodia elata7.070
SRR5643514five period of Gastrodia elata7.340
SRR5643515five period of Gastrodia elata6.040
SRR5643524five period of Gastrodia elata6.980
SRR5643525five period of Gastrodia elata3.190
SRR5643528five period of Gastrodia elata2.230
SRR5643658five period of Gastrodia elata1.930
SRR5643659five period of Gastrodia elata11.840
SRR5643660five period of Gastrodia elata13.990
SRR5643661five period of Gastrodia elata11.750
SRR5643662five period of Gastrodia elata9.230
SRR5643663five period of Gastrodia elata11.630
SRR5643664five period of Gastrodia elata9.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.460
SRR6049655Rhizomagastrodiae_C368-T10_good_113.540
SRR6049656Rhizomagastrodiae_C368-T07_good_114.730
SRR6049657Rhizomagastrodiae_C368-T07_good_111.290
SRR6049658Rhizomagastrodiae_C368-T04_good_111.360
SRR6049659Rhizomagastrodiae_C368-T04_good_18.870
SRR6049660Rhizomagastrodiae_C368-T01_good_114.230
SRR6049661Rhizomagastrodiae_C368-T04_good_112.460
SRR6049662Rhizomagastrodiae_C368-T01_good_116.100
SRR6049663Rhizomagastrodiae_C368-T01_good_114.360
SRR6049664Rhizomagastrodiae_C368-T10_good_112.550
SRR6049665Rhizomagastrodiae_C368-T10_good_112.550
SRP279888GastroGastrodia elata tuber 17.10
JuvenJuvenile tuber13.54
Mother_GastroMother tuber of Gastrodia elata 6.45
Mother_JuvenMother tuber of Juvenile 5.20