Detail information of GWHGAAEX017526/evm.TU.scaffold_82.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2824 | 4.00E-50 | Glutaredoxin-related protein |
| nr | gi|743839686|ref|XP_010937069.1| | 3.64E-75 | PREDICTED: uncharacterized protein At3g28850-like [Elaeis guineensis] |
| Swissprot | tr|Q9FLE8|Y5986_ARATH | 2.00E-59 | Uncharacterized protein At5g39865 |
| trEMBL | tr|C0PHS9|C0PHS9_MAIZE | 3.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:ACN34745.1, ECO:0000313|EnsemblPlants:GRMZM2G041809_P01} |
| TAIR | AT3G28850 | 4.00E-50 | Glutaredoxin family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000078 | 693079 | 694571 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017526
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00462.23 | Glutaredoxin | 138 | 201 | 5.70E-14 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0045454 | Biological Process | cell redox homeostasis |
| GO:0015035 | Molecular Function | protein disulfide oxidoreductase activity |
| GO:0009055 | Molecular Function | electron carrier activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.280 |
| SRR2545915 | Juvenile tuber | 2.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.710 |
| SRR5643514 | five period of Gastrodia elata | 7.000 | |
| SRR5643515 | five period of Gastrodia elata | 20.240 | |
| SRR5643524 | five period of Gastrodia elata | 7.720 | |
| SRR5643525 | five period of Gastrodia elata | 6.770 | |
| SRR5643528 | five period of Gastrodia elata | 3.450 | |
| SRR5643658 | five period of Gastrodia elata | 1.970 | |
| SRR5643659 | five period of Gastrodia elata | 9.460 | |
| SRR5643660 | five period of Gastrodia elata | 2.010 | |
| SRR5643661 | five period of Gastrodia elata | 5.600 | |
| SRR5643662 | five period of Gastrodia elata | 7.950 | |
| SRR5643663 | five period of Gastrodia elata | 5.000 | |
| SRR5643664 | five period of Gastrodia elata | 10.620 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.500 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.210 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.580 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.680 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.740 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.350 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.170 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.710 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.710 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.47 |
| Juven | Juvenile tuber | 1.79 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.24 | |
| Mother_Juven | Mother tuber of Juvenile | 6.35 |