Detail information of GWHGAAEX017528/evm.TU.scaffold_82.17


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18692.00E-41Splicing coactivator SRm160/300, subunit SRm300
nrgi|695001210|ref|XP_009415120.1|1.13E-53PREDICTED: protein starmaker [Musa acuminata subsp. malaccensis]
trEMBLtr|M0S2I2|M0S2I2_MUSAM2.00E-54Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P23750_001}
TAIRAT3G49600_12.00E-41Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000078785844803552-
Transcript Sequence

Network for GWHGAAEX017528

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08312.11cwf2158996.70E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms183.040
SRR2545915Juvenile tuber194.090
SRP108465SRR5643513five period of Gastrodia elata48.320
SRR5643514five period of Gastrodia elata38.890
SRR5643515five period of Gastrodia elata38.780
SRR5643524five period of Gastrodia elata36.050
SRR5643525five period of Gastrodia elata36.430
SRR5643528five period of Gastrodia elata38.670
SRR5643658five period of Gastrodia elata41.540
SRR5643659five period of Gastrodia elata58.870
SRR5643660five period of Gastrodia elata66.600
SRR5643661five period of Gastrodia elata58.980
SRR5643662five period of Gastrodia elata60.490
SRR5643663five period of Gastrodia elata58.530
SRR5643664five period of Gastrodia elata70.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_173.110
SRR6049655Rhizomagastrodiae_C368-T10_good_173.120
SRR6049656Rhizomagastrodiae_C368-T07_good_154.250
SRR6049657Rhizomagastrodiae_C368-T07_good_192.800
SRR6049658Rhizomagastrodiae_C368-T04_good_175.710
SRR6049659Rhizomagastrodiae_C368-T04_good_1109.540
SRR6049660Rhizomagastrodiae_C368-T01_good_176.350
SRR6049661Rhizomagastrodiae_C368-T04_good_181.710
SRR6049662Rhizomagastrodiae_C368-T01_good_141.310
SRR6049663Rhizomagastrodiae_C368-T01_good_158.010
SRR6049664Rhizomagastrodiae_C368-T10_good_143.170
SRR6049665Rhizomagastrodiae_C368-T10_good_143.170
SRP279888GastroGastrodia elata tuber 31.33
JuvenJuvenile tuber50.43
Mother_GastroMother tuber of Gastrodia elata 26.69
Mother_JuvenMother tuber of Juvenile 35.16