Detail information of GWHGAAEX017536/evm.TU.scaffold_82.39
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0752 | 1.00E-172 | Mitochondrial solute carrier protein |
| nr | gi|720042530|ref|XP_010269268.1| | 0 | PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Nelumbo nucifera] |
| Swissprot | tr|Q9LV81|BRTL3_ARATH | 3.00E-173 | Probable mitochondrial adenine nucleotide transporter BTL3 |
| trEMBL | tr|A0A096PZP9|A0A096PZP9_MAIZE | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G015571_P01} |
| TAIR | AT5G64970 | 1.00E-172 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000078 | 1546221 | 1572080 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017536
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 121 | 207 | 3.80E-18 |
| PF00153.26 | Mito_carr | 214 | 301 | 6.70E-19 |
| PF00153.26 | Mito_carr | 328 | 414 | 5.20E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 16.610 |
| SRR2545915 | Juvenile tuber | 19.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 28.730 |
| SRR5643514 | five period of Gastrodia elata | 30.730 | |
| SRR5643515 | five period of Gastrodia elata | 27.920 | |
| SRR5643524 | five period of Gastrodia elata | 31.730 | |
| SRR5643525 | five period of Gastrodia elata | 51.570 | |
| SRR5643528 | five period of Gastrodia elata | 48.810 | |
| SRR5643658 | five period of Gastrodia elata | 53.810 | |
| SRR5643659 | five period of Gastrodia elata | 48.400 | |
| SRR5643660 | five period of Gastrodia elata | 47.510 | |
| SRR5643661 | five period of Gastrodia elata | 47.060 | |
| SRR5643662 | five period of Gastrodia elata | 45.950 | |
| SRR5643663 | five period of Gastrodia elata | 51.300 | |
| SRR5643664 | five period of Gastrodia elata | 39.780 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.600 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.940 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 26.450 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.280 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.630 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.810 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 32.960 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.260 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 41.340 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 41.340 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 31.57 |
| Juven | Juvenile tuber | 30.82 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 27.62 | |
| Mother_Juven | Mother tuber of Juvenile | 28.26 |