Detail information of GWHGAAEX017542/evm.TU.scaffold_82.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42823.00E-31Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
nrgi|743840920|ref|XP_010937395.1|1.66E-82PREDICTED: uncharacterized protein LOC105056785 [Elaeis guineensis]
Swissprottr|Q9LJG8|ASIL2_ARATH4.00E-16Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|M0T415|M0T415_MUSAM3.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P04170_001}
TAIRAT3G248603.00E-31Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007823107892311866-
Transcript Sequence

Network for GWHGAAEX017542

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4201057.50E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.710
SRR2545915Juvenile tuber30.880
SRP108465SRR5643513five period of Gastrodia elata63.340
SRR5643514five period of Gastrodia elata66.250
SRR5643515five period of Gastrodia elata52.310
SRR5643524five period of Gastrodia elata61.540
SRR5643525five period of Gastrodia elata63.870
SRR5643528five period of Gastrodia elata56.080
SRR5643658five period of Gastrodia elata62.180
SRR5643659five period of Gastrodia elata65.710
SRR5643660five period of Gastrodia elata55.020
SRR5643661five period of Gastrodia elata54.620
SRR5643662five period of Gastrodia elata66.300
SRR5643663five period of Gastrodia elata51.410
SRR5643664five period of Gastrodia elata61.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.160
SRR6049655Rhizomagastrodiae_C368-T10_good_130.270
SRR6049656Rhizomagastrodiae_C368-T07_good_160.190
SRR6049657Rhizomagastrodiae_C368-T07_good_135.440
SRR6049658Rhizomagastrodiae_C368-T04_good_132.990
SRR6049659Rhizomagastrodiae_C368-T04_good_135.340
SRR6049660Rhizomagastrodiae_C368-T01_good_135.130
SRR6049661Rhizomagastrodiae_C368-T04_good_131.100
SRR6049662Rhizomagastrodiae_C368-T01_good_151.430
SRR6049663Rhizomagastrodiae_C368-T01_good_146.010
SRR6049664Rhizomagastrodiae_C368-T10_good_173.500
SRR6049665Rhizomagastrodiae_C368-T10_good_173.500
SRP279888GastroGastrodia elata tuber 45.94
JuvenJuvenile tuber42.30
Mother_GastroMother tuber of Gastrodia elata 47.79
Mother_JuvenMother tuber of Juvenile 46.76