Detail information of GWHGAAEX017545/evm.TU.scaffold_82.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672181883|ref|XP_008811174.1|0PREDICTED: probable pectin methyltransferase QUA2 [Phoenix dactylifera]
Swissprottr|Q9C9Q8|PMTT_ARATH0Probable pectin methyltransferase QUA2
trEMBLtr|M0U9G2|M0U9G2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP15530_001}
TAIRAT1G782400S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007824212352429411+
Transcript Sequence

Network for GWHGAAEX017545

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03141.15Methyltransf_291326547.50E-144
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.250
SRR2545915Juvenile tuber31.910
SRP108465SRR5643513five period of Gastrodia elata21.880
SRR5643514five period of Gastrodia elata25.020
SRR5643515five period of Gastrodia elata32.000
SRR5643524five period of Gastrodia elata28.710
SRR5643525five period of Gastrodia elata24.480
SRR5643528five period of Gastrodia elata46.560
SRR5643658five period of Gastrodia elata32.650
SRR5643659five period of Gastrodia elata24.500
SRR5643660five period of Gastrodia elata24.250
SRR5643661five period of Gastrodia elata24.500
SRR5643662five period of Gastrodia elata20.890
SRR5643663five period of Gastrodia elata20.130
SRR5643664five period of Gastrodia elata14.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.400
SRR6049655Rhizomagastrodiae_C368-T10_good_112.020
SRR6049656Rhizomagastrodiae_C368-T07_good_116.450
SRR6049657Rhizomagastrodiae_C368-T07_good_113.040
SRR6049658Rhizomagastrodiae_C368-T04_good_114.540
SRR6049659Rhizomagastrodiae_C368-T04_good_116.570
SRR6049660Rhizomagastrodiae_C368-T01_good_118.460
SRR6049661Rhizomagastrodiae_C368-T04_good_115.660
SRR6049662Rhizomagastrodiae_C368-T01_good_121.410
SRR6049663Rhizomagastrodiae_C368-T01_good_122.460
SRR6049664Rhizomagastrodiae_C368-T10_good_118.470
SRR6049665Rhizomagastrodiae_C368-T10_good_118.470
SRP279888GastroGastrodia elata tuber 19.10
JuvenJuvenile tuber18.84
Mother_GastroMother tuber of Gastrodia elata 29.04
Mother_JuvenMother tuber of Juvenile 20.14